comparison readme.md @ 4:aeb1f7daa7c2 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/osra commit 74daed54894d9769a251a2ca6a46d96b7a27e461
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date Thu, 09 Nov 2017 03:41:42 -0500
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1 ## OSRA: Optical Structure Recognition Application
2
3 OSRA is a utility designed to convert graphical representations of chemical
4 structures, as they appear in journal articles, patent documents, textbooks,
5 trade magazines etc., into SMILES (Simplified Molecular Input Line Entry
6 Specification - see http://en.wikipedia.org/wiki/SMILES) or
7 SD files - a computer recognizable molecular structure format.
8 OSRA can read a document in any of the over 90 graphical formats parseable by
9 ImageMagick - including GIF, JPEG, PNG, TIFF, PDF, PS etc., and generate
10 the SMILES or SDF representation of the molecular structure images encountered
11 within that document.
12
13 Note that any software designed for optical recognition is unlikely to be
14 perfect, and the output produced might, and probably will, contain errors,
15 so curation by a human knowledgeable in chemical structures is highly recommended.
16
17 http://cactus.nci.nih.gov/osra/
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19 The wrapper comes with an automatic installation of all dependencies through the
20 galaxy toolshed.