Mercurial > repos > bgruening > repeat_masker
annotate test-data/repeats.fasta @ 9:438f65cb1d14 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 7f117678cfee55bb18706fd1bf14c0a380261eab"
| author | iuc |
|---|---|
| date | Tue, 18 Aug 2020 05:39:55 -0400 |
| parents | bdfc22c1c3e3 |
| children |
| rev | line source |
|---|---|
|
3
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
1 >Asian_seabass_ONSAT_SB_Concensus_Lenght_170_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
2 CGAAAAATTTAATAATTTAGGGGTCTTGAGCATGGGCGTGGTAAAATGCCCTCGGTAGCG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
3 CCACCTACATTTTTAAACGGAACAGCCCCTCAAGCCCGTTGCGCCTAAAAATCTGAAAAT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
4 CTGCACACATATGTAACATCCCATGACGCACCAAAAAGTCTCTTGGAGCCA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
5 >Asian_seabass_MOSAT_SB_T_34a_satellite_DNA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
6 TTTGTGACATCACTACATAGTTTGTTGAAAACGTAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
7 >Asian_seabass_MOSAT_SB_T_34b_satellite_DNA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
8 TTTGTGACATCACACATAGTTGTGGGTCAGTAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
9 >Sat_38 |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
10 AAAAAATGTCATAGTATAGTATGGCGTCAAAAAACATG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
11 >Asian_seabass_Sat_217_Consensus_Length_217_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
12 AGTAAACAAGCATTATGGTTGAAACCATAATTTCCTGTCGGGAGAGCCTTTCCCTCTTTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
13 GTGCACTGTATGCAATCCCAGAGTGTGAATAAGCGCTTTTCCAGCGTTTTGAGGCTTATT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
14 CAGCTCAGAATGGCTTAATACTGCACTATCTGACCAGGACAAAGACAAACTAAGAACTCA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
15 GCCACACGGACATGAAAGTTGTTTTACTTACAATATT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
16 >Asian_seabass_Sat_217_Consensus_Length_427_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
17 CCAGCGTTTTGAGGCTTATTCAGCTCAGAATGGCTTAATACTGCACTATCTGACCAGGAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
18 AAGACAAACTAAGAACTCAACACACTGACATGAAAGTTTCTATATTTCTATTAAAATAAA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
19 CAAACATTATGGTTGAAACCATAATTTCATTTCGGGAGAGCCTTTCCCTCTTTGTGGCAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
20 TGTATGTAATCTGAAGTGTGAATAACGCTTTTCCCGCGTTTGAGGCTTATTCAGCTCAGA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
21 ATGGCTTAATACTGCACTATCTGACCAGGACAAGACAAACTAAGAACTCAGCCACACGGA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
22 CATGAAAGTTGTTTACTTTACAATATTAGTAAACAAGCATTATGGTTGAAACCATAATTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
23 CCTGTCGGGAAGAGCTTCCCTCTTTTTGTGCACTGTATGCAATCCCAGAGTGTGAATAAG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
24 CGCTTTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
25 >Asian_seabass_Sat_LM_Consensus_Length_453_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
26 CCCAACAAAATAGCACTTACTGCTTTCCAAATTCAAGTCTGTGCCTGTGTTAGGGTAATG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
27 TTGGTGATAAATTGATGTACTTAGCTTATCCTGTGAAAATGGTGTAAAATGGCAGTCTCC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
28 ATGTTTGTTGAAGAAACTCACAACCAAGACAACCCCAAAGAGAAGCACTTATGAAGACAG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
29 AAATCATGAGTGGCTCTTATTGAAGTGATCAGAGTTGGACTCCATTAAGAAAATGGCTTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
30 CAATGTAGTCAGTTGCTTTGTCACTTAAAACTGCCCCAACAAGTAGCACTTACTGCAATT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
31 TGGTAGTCAAAGTCAATGCTCAAGTTAAGGGTAATAGTAGTGACATAATAGAAAAATCTC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
32 TAAATATATTTGCTGGCAGCTTTAATATACAGAATGAGTGCCATGATGAATTCTTGATAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
33 AGAACAGGGACTTCCAAAATCAGCCAACACTAA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
34 >Asian_seabass_Sat_LM_Consensus_Length_218_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
35 CCCAACAAAATAGCACTTACTGCTTTCCAAATTCAAGTCTGTGCCTGTGTTAGGGTAATG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
36 TTGGTGATAAATTGATGTACTTAGCTTATCCTGTGAAAATGGTGTAAAATGGCAGTCTCC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
37 TGTTTGTTGAAGAAACTCACAACCAAGACAACCCCAAAGAGAAGCACTTATGAAGACAGA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
38 AATCATGAGTGGCTCTTATTGAAGTGATCAGAGTTGG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
39 >Asian_seabass_Sat_LM Consensus_Length_150_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
40 CTCACAACCAAGACAACCCCAAAGAGAAGCACTTATGAAGACAGAAATCATGAGTGGCTC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
41 TTATTGAAGTGATCAGAGTTGGACTCCATTAAGAAAATGGCTTTCAATGTAGTCAGTTGC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
42 TTTGTCACTTAAAACTGCCCCAACAAGTAGCA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
43 >Asian_seabass_Sat_Unk_Consensus_Length_341_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
44 GTTTGGGTAAAAATATTGTCTATTTACGAGCTATCCTCTATATATTTTTGATCTGATTAA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
45 TAAATACCTCTAGCCCACAAACTGTGGTATTTTGCTATGTGGCAGTTCACCCGAAAGTCC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
46 AGTAGCATTTATCGCATTTTCTAAAGATAGTCAGTGCCTGAAAGTTTGAGGCAGATAAAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
47 AAATTGTTCAAGTAAGAACTATATCTTTCTTATGATTTTACCGCAATCATACAGGTTGTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
48 TCTTGTGGTCTGCTGGGCATTGTATCCCTTTGTTGTATGGATTTTTCCTTTCTTTAATGA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
49 TCTCCTCCCTGGAGTTTGTAATCCCTGTTTGTAGTGGAATT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
50 >Asian_seabass_Sat_Unk_Consensus_Length_789_bp |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
51 CAAAAAAATGGAAAAAAAAAAAGTGGCTCATTTGAAGTGAATCAGAGTTGGGTAACATTG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
52 TCCTTAATTACAGCTATGCTTATATACTTGATCTGATAATAATACTCTAGCCACAATCTG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
53 TGGGTATTCTGCTATTTGCAGTCCACCCAAAGTCATAGCATTTAATCCATTCTAGGAAGA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
54 TACGTCAGTGCTGAGTTGAGCCAATAACACCAAATTGTCATAAGAACTATTATTTTCTTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
55 ATGATTTTTACGCATCAGTACAGGTGTTTTCTTGTGGTTTCTGCTGCATGTATCCCTGTT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
56 GTAAGTGGATTCTCCTTTGCTTATGATCTCCTCCGCTGCGTTGTATCCTGTTTGTAGTGG |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
57 ATTTCCTTGCACTGATTCTGCCCGCTCTTAATACTGAATGAACGCCCTCCCACCAGTAGT |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
58 ACTGCCACCTTTGTTTTTTCACAAAGTGTTCAATGGCCTTGATAATGACTTGGTAACTAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
59 ATCACCACTTTTTTGTACGTAATCAACAGACAATCACCCATTAAATTCATGCGGCCATTA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
60 GGCAGCTTGATGAGCTGGACATTTGACCTCCCCAATGAATCTTTGCTGATGGGAAACTTA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
61 TTGCCACCATAAAGTGAACCAGCATTGCTATGTCCATGCTGTAATTTGAAAACCCAATAC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
62 AAAGAAGCCCTGCATATATACCTCCCAAATTGGCTTCTGAGACCCGGGCGTAATCACTGC |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
63 ATGGCCATAGATAAACATTGAAATCTTCTGTTGCAGTCAGTTTGCTTTTTGTCAACTTTA |
|
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
64 AAAACTGCC |