Mercurial > repos > bgruening > repeat_masker
annotate test-data/repeats.fasta @ 8:ade773848c3d draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit b0aaae4488b95b54eaf85010f999b2638dfadd3e"
author | iuc |
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date | Thu, 23 Jan 2020 04:40:29 -0500 |
parents | bdfc22c1c3e3 |
children |
rev | line source |
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3
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
1 >Asian_seabass_ONSAT_SB_Concensus_Lenght_170_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
2 CGAAAAATTTAATAATTTAGGGGTCTTGAGCATGGGCGTGGTAAAATGCCCTCGGTAGCG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
3 CCACCTACATTTTTAAACGGAACAGCCCCTCAAGCCCGTTGCGCCTAAAAATCTGAAAAT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
4 CTGCACACATATGTAACATCCCATGACGCACCAAAAAGTCTCTTGGAGCCA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
5 >Asian_seabass_MOSAT_SB_T_34a_satellite_DNA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
6 TTTGTGACATCACTACATAGTTTGTTGAAAACGTAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
7 >Asian_seabass_MOSAT_SB_T_34b_satellite_DNA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
8 TTTGTGACATCACACATAGTTGTGGGTCAGTAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
9 >Sat_38 |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
10 AAAAAATGTCATAGTATAGTATGGCGTCAAAAAACATG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
11 >Asian_seabass_Sat_217_Consensus_Length_217_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
12 AGTAAACAAGCATTATGGTTGAAACCATAATTTCCTGTCGGGAGAGCCTTTCCCTCTTTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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13 GTGCACTGTATGCAATCCCAGAGTGTGAATAAGCGCTTTTCCAGCGTTTTGAGGCTTATT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
14 CAGCTCAGAATGGCTTAATACTGCACTATCTGACCAGGACAAAGACAAACTAAGAACTCA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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15 GCCACACGGACATGAAAGTTGTTTTACTTACAATATT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
16 >Asian_seabass_Sat_217_Consensus_Length_427_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
17 CCAGCGTTTTGAGGCTTATTCAGCTCAGAATGGCTTAATACTGCACTATCTGACCAGGAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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18 AAGACAAACTAAGAACTCAACACACTGACATGAAAGTTTCTATATTTCTATTAAAATAAA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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19 CAAACATTATGGTTGAAACCATAATTTCATTTCGGGAGAGCCTTTCCCTCTTTGTGGCAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
20 TGTATGTAATCTGAAGTGTGAATAACGCTTTTCCCGCGTTTGAGGCTTATTCAGCTCAGA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
21 ATGGCTTAATACTGCACTATCTGACCAGGACAAGACAAACTAAGAACTCAGCCACACGGA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
22 CATGAAAGTTGTTTACTTTACAATATTAGTAAACAAGCATTATGGTTGAAACCATAATTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
23 CCTGTCGGGAAGAGCTTCCCTCTTTTTGTGCACTGTATGCAATCCCAGAGTGTGAATAAG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
24 CGCTTTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
25 >Asian_seabass_Sat_LM_Consensus_Length_453_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
26 CCCAACAAAATAGCACTTACTGCTTTCCAAATTCAAGTCTGTGCCTGTGTTAGGGTAATG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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27 TTGGTGATAAATTGATGTACTTAGCTTATCCTGTGAAAATGGTGTAAAATGGCAGTCTCC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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28 ATGTTTGTTGAAGAAACTCACAACCAAGACAACCCCAAAGAGAAGCACTTATGAAGACAG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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29 AAATCATGAGTGGCTCTTATTGAAGTGATCAGAGTTGGACTCCATTAAGAAAATGGCTTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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30 CAATGTAGTCAGTTGCTTTGTCACTTAAAACTGCCCCAACAAGTAGCACTTACTGCAATT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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31 TGGTAGTCAAAGTCAATGCTCAAGTTAAGGGTAATAGTAGTGACATAATAGAAAAATCTC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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32 TAAATATATTTGCTGGCAGCTTTAATATACAGAATGAGTGCCATGATGAATTCTTGATAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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33 AGAACAGGGACTTCCAAAATCAGCCAACACTAA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
34 >Asian_seabass_Sat_LM_Consensus_Length_218_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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35 CCCAACAAAATAGCACTTACTGCTTTCCAAATTCAAGTCTGTGCCTGTGTTAGGGTAATG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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36 TTGGTGATAAATTGATGTACTTAGCTTATCCTGTGAAAATGGTGTAAAATGGCAGTCTCC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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37 TGTTTGTTGAAGAAACTCACAACCAAGACAACCCCAAAGAGAAGCACTTATGAAGACAGA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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38 AATCATGAGTGGCTCTTATTGAAGTGATCAGAGTTGG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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39 >Asian_seabass_Sat_LM Consensus_Length_150_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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40 CTCACAACCAAGACAACCCCAAAGAGAAGCACTTATGAAGACAGAAATCATGAGTGGCTC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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41 TTATTGAAGTGATCAGAGTTGGACTCCATTAAGAAAATGGCTTTCAATGTAGTCAGTTGC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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42 TTTGTCACTTAAAACTGCCCCAACAAGTAGCA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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43 >Asian_seabass_Sat_Unk_Consensus_Length_341_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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44 GTTTGGGTAAAAATATTGTCTATTTACGAGCTATCCTCTATATATTTTTGATCTGATTAA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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45 TAAATACCTCTAGCCCACAAACTGTGGTATTTTGCTATGTGGCAGTTCACCCGAAAGTCC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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46 AGTAGCATTTATCGCATTTTCTAAAGATAGTCAGTGCCTGAAAGTTTGAGGCAGATAAAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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47 AAATTGTTCAAGTAAGAACTATATCTTTCTTATGATTTTACCGCAATCATACAGGTTGTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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48 TCTTGTGGTCTGCTGGGCATTGTATCCCTTTGTTGTATGGATTTTTCCTTTCTTTAATGA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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49 TCTCCTCCCTGGAGTTTGTAATCCCTGTTTGTAGTGGAATT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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50 >Asian_seabass_Sat_Unk_Consensus_Length_789_bp |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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51 CAAAAAAATGGAAAAAAAAAAAGTGGCTCATTTGAAGTGAATCAGAGTTGGGTAACATTG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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52 TCCTTAATTACAGCTATGCTTATATACTTGATCTGATAATAATACTCTAGCCACAATCTG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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53 TGGGTATTCTGCTATTTGCAGTCCACCCAAAGTCATAGCATTTAATCCATTCTAGGAAGA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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54 TACGTCAGTGCTGAGTTGAGCCAATAACACCAAATTGTCATAAGAACTATTATTTTCTTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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55 ATGATTTTTACGCATCAGTACAGGTGTTTTCTTGTGGTTTCTGCTGCATGTATCCCTGTT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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56 GTAAGTGGATTCTCCTTTGCTTATGATCTCCTCCGCTGCGTTGTATCCTGTTTGTAGTGG |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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57 ATTTCCTTGCACTGATTCTGCCCGCTCTTAATACTGAATGAACGCCCTCCCACCAGTAGT |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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58 ACTGCCACCTTTGTTTTTTCACAAAGTGTTCAATGGCCTTGATAATGACTTGGTAACTAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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59 ATCACCACTTTTTTGTACGTAATCAACAGACAATCACCCATTAAATTCATGCGGCCATTA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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60 GGCAGCTTGATGAGCTGGACATTTGACCTCCCCAATGAATCTTTGCTGATGGGAAACTTA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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61 TTGCCACCATAAAGTGAACCAGCATTGCTATGTCCATGCTGTAATTTGAAAACCCAATAC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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62 AAAGAAGCCCTGCATATATACCTCCCAAATTGGCTTCTGAGACCCGGGCGTAATCACTGC |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
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63 ATGGCCATAGATAAACATTGAAATCTTCTGTTGCAGTCAGTTTGCTTTTTGTCAACTTTA |
bdfc22c1c3e3
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit 8dacb4321122d92df0983e0794cf23572be03224
iuc
parents:
diff
changeset
|
64 AAAACTGCC |