Mercurial > repos > bgruening > repeat_masker
comparison test-data/fake_repbase.embl @ 4:04f5c3d7448e draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/repeat_masker commit cbba6947f1380751e1db3fa5b043af630523fd86
| author | iuc |
|---|---|
| date | Fri, 04 May 2018 07:59:50 -0400 |
| parents | |
| children |
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| 3:bdfc22c1c3e3 | 4:04f5c3d7448e |
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| 1 CC Fake repbase-like embl file, using data from DfamConsensus.embl* | |
| 2 CC **************************************************************** | |
| 3 XX | |
| 4 ID ACROBAT1 repeatmasker; DNA; ???; 768 BP. | |
| 5 CC consensus - See RepBase for additional annotations. | |
| 6 XX | |
| 7 SQ Sequence 768 BP; 178 A; 194 C; 215 G; 181 T; 0 other; | |
| 8 ggtgatgctg ccaacttact gatttagtgt atgatggtgt ttttgaggtg ctccagtggc 60 | |
| 9 ttctgtttct atcagctgtc cctcctgttc agctactgac ggggtggtgc gtaacggcaa 120 | |
| 10 aagcaccgcc ggacatcagc gctatctctg ctctcactgc cgtaaaacat ggcaactgca 180 | |
| 11 gttcacttac accgcttctc aacccggtac gcaccagaaa atcattgata tggccatgaa 240 | |
| 12 tggcgttgga tgccgggcaa cagcccgcat tatgggcgtt ggcctcaaca cgattttacg 300 | |
| 13 tcacttaaaa aactcaggcc gcagtcggta acctcgcgca tacagccggg cagtgacgtc 360 | |
| 14 atcgtctgcg cggaaatgga cgaacagtgg ggctatgtcg gggctaaatc gcgccagcgc 420 | |
| 15 tggctgtttt acgcgtatga cagtctccgg aagacggttg ttgcgcacgt attcggtgaa 480 | |
| 16 cgcactatgg cgacgctggg gcgtcttatg agcctgctgt caccctttga cgtggtgata 540 | |
| 17 tggatgacgg atggctggcc gctgtatgaa tcccgcctga agggaaagct gcacgtaatc 600 | |
| 18 agcaagcgat atacgcagcg aattgagcgg cataacctga atctgaggca gcacctggca 660 | |
| 19 cggctgggac ggaagtcgct gtcgttctca aaatcggtgg agctgcatga caaagtcatc 720 | |
| 20 gggcattatc tgaacataaa acactatcaa taagttggag tcattacc 768 | |
| 21 // |