Mercurial > repos > bgruening > repeat_masker

comparison test-data/small.fasta.gff @ 14:7563ea7a922d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmasker commit 7a5f368a5859e659aa36d0358bb96ca12574e2cc
author iuc
date Mon, 24 Apr 2023 10:29:31 +0000
parents 72aade318318
children
comparison
equal deleted inserted replaced
13:3f987772e283 14:7563ea7a922d
1 ##gff-version 2 1 ##gff-version 3
2 ##date 2021-05-20 2 ##sequence-region scaffold_1 1 14220
3 ##sequence-region rm_input.fasta 3 scaffold_1 RepeatMasker dispersed_repeat 613 632 0.0 + . ID=1;Target "Motif:(GT)n" 1 20
4 scaffold_1 RepeatMasker similarity 613 632 0.0 + . Target "Motif:(GT)n" 1 20 4 scaffold_1 RepeatMasker dispersed_repeat 780 824 18.3 + . ID=2;Target "Motif:(ATAATA)n" 1 45
5 scaffold_1 RepeatMasker similarity 780 824 18.3 + . Target "Motif:(ATAATA)n" 1 45 5 scaffold_1 RepeatMasker dispersed_repeat 2231 2274 23.9 + . ID=3;Target "Motif:(CAGA)n" 1 46
6 scaffold_1 RepeatMasker similarity 2231 2274 23.9 + . Target "Motif:(CAGA)n" 1 46 6 scaffold_1 RepeatMasker dispersed_repeat 4853 4901 18.4 + . ID=4;Target "Motif:(TC)n" 1 54
7 scaffold_1 RepeatMasker similarity 4853 4901 18.4 + . Target "Motif:(TC)n" 1 54 7 scaffold_1 RepeatMasker dispersed_repeat 6230 6284 19.1 + . ID=5;Target "Motif:(TAATTAA)n" 1 52
8 scaffold_1 RepeatMasker similarity 6230 6284 19.1 + . Target "Motif:(TAATTAA)n" 1 52 8 scaffold_1 RepeatMasker dispersed_repeat 6548 6606 28.3 + . ID=6;Target "Motif:(GACA)n" 1 57
9 scaffold_1 RepeatMasker similarity 6548 6606 28.3 + . Target "Motif:(GACA)n" 1 57 9 scaffold_1 RepeatMasker dispersed_repeat 11981 12050 2.9 + . ID=7;Target "Motif:(CT)n" 1 71
10 scaffold_1 RepeatMasker similarity 11981 12050 2.9 + . Target "Motif:(CT)n" 1 71 10 scaffold_1 RepeatMasker dispersed_repeat 12078 12113 15.4 + . ID=8;Target "Motif:(CT)n" 1 37
11 scaffold_1 RepeatMasker similarity 12078 12113 15.4 + . Target "Motif:(CT)n" 1 37