Mercurial > repos > bgruening > sailfish
diff sailfish.xml @ 2:20eab032389f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit b9ccc98180d52233931768511b909ccd6142f158
author | bgruening |
---|---|
date | Mon, 21 Dec 2015 14:00:53 -0500 |
parents | 06646e81c543 |
children | 03c74355227f |
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--- a/sailfish.xml Tue Nov 10 20:19:23 2015 -0500 +++ b/sailfish.xml Mon Dec 21 14:00:53 2015 -0500 @@ -211,7 +211,7 @@ **What it does** Sailfish is a tool for transcript quantification from RNA-seq data. It -requires a set of target transcripts (either from a reference or _de-novo_ +requires a set of target transcripts (either from a reference or de-novo assembly) to quantify. All you need to run Sailfish is a fasta file containing your reference transcripts and a (set of) fasta/fastq file(s) containing your reads. Sailfish runs in two phases; indexing and quantification. The indexing