Mercurial > repos > bgruening > sailfish

view tool-data/sailfish_indexes.loc.sample @ 5:1b4ed566a41c draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sailfish commit 03edb751808fef8bce744ebcbad5661a32373211
author bgruening
date Wed, 02 Nov 2016 10:30:36 -0400
parents 3b4ed0e473dc
children
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# This is a sample file distributed with Galaxy that is used to define a
# list of sailfish indices, using three columns tab separated:
#
# sailfish_index_id{tab}Sailfish Index desciption{tab}/data/sailfish_indexes/sailfish_index_id/
#
# An index can be created with the following command:
#
# sailfish index
#     --transcripts your_transcripts.fasta
#     --kmerSize 21
#     --out /data/sailfish_indexes/sailfish_index_id/
#     --threads 4
#