Mercurial > repos > bgruening > salmonquantmerge

comparison vpolo_convert.py @ 6:88c07fc4024c draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit 26e9f1627e91a4be6bdc7e71cd44f1ea1701ee6f"
author bgruening
date Thu, 22 Jul 2021 14:06:29 +0000
parents cfb0849582e1
children
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5:cfb0849582e1 6:88c07fc4024c
1 #!/usr/bin/env python 1 #!/usr/bin/env python
2 import argparse 2 import argparse
3 import os 3 import os
4 4
5 from vpolo.alevin import parser as par 5 from vpolo.alevin import parser as par
6
7 6
8 parser = argparse.ArgumentParser() 7 parser = argparse.ArgumentParser()
9 parser.add_argument("--mtx", "-m", action="store_true", help="--dumpMtx flag set") 8 parser.add_argument("--mtx", "-m", action="store_true", help="--dumpMtx flag set")
10 parser.add_argument("--umi", "-u", action="store_true", help="--dumpUmiGraph flag set") 9 parser.add_argument("--umi", "-u", action="store_true", help="--dumpUmiGraph flag set")
11 args = parser.parse_args() 10 args = parser.parse_args()