comparison sparse.xml @ 34:4efd73be98bb draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit e2a5eade6d0e5ddf3a47630381a0ad90d80e8a04"

33:ecd247e1ea9c

<tool id="scipy_sparse" name="Sparse Matrix Functions" version="@VERSION@">
    <description>for manipulating 2-D Scipy sparse numeric data</description>
    <macros>
        <import>main_macros.xml</import>
    </macros>
    <expand macro="python_requirements"/>
    <expand macro="macro_stdio"/>
    <version_command>echo "@VERSION@"</version_command>
    <command>
        <![CDATA[
        python "$sparse_script" '$inputs'
        ]]>

            <param name="selected_function" type="select" label="Select a task:">
                <option value="vstack" selected="true">Stack sparse matrices vertically (vstack)</option>
                <option value="hstack">Stack sparse matrices horizontally (hstack)</option>
            </param>
            <when value="vstack">
                <expand macro="multiple_input" name="sparse_inputs"/>
            </when>
            <when value="hstack">
                <expand macro="multiple_input" name="sparse_inputs"/>
            </when>
        </conditional>
    </inputs>
    <outputs>
        <data format="txt" name="outfile"/>
    </outputs>
    <tests>
        <test>
            <param name="selected_function" value="vstack"/>
            <param name="sparse_inputs_0|input" value="csr_sparse1.mtx" ftype="txt"/>
            <param name="sparse_inputs_1|input" value="csr_sparse2.mtx" ftype="txt"/>
            <output name="outfile" file="csr_stack_result01.mtx"/>
        </test>
        <test>
            <param name="selected_function" value="hstack"/>
            <param name="sparse_inputs_0|input" value="csc_sparse1.mtx" ftype="txt"/>
            <param name="sparse_inputs_1|input" value="csc_sparse2.mtx" ftype="txt"/>
            <output name="outfile" file="csc_stack_result01.mtx"/>
        </test>
    </tests>
    <help>
        <![CDATA[
**What it does**

**Parameters:** blocks sequence of sparse matrices with compatible shapes format. 

For more information please refer to  DOI:10.1109/MCSE.2011.37.
        ]]>
    </help>
    <expand macro="scipy_citation"/>
</tool>

34:4efd73be98bb

<tool id="scipy_sparse" name="Sparse Matrix Functions" version="@VERSION@" profile="20.05">
    <description>for manipulating 2-D Scipy sparse numeric data</description>
    <macros>
        <import>main_macros.xml</import>
    </macros>
    <expand macro="python_requirements" />
    <expand macro="macro_stdio" />
    <version_command>echo "@VERSION@"</version_command>
    <command>
        <![CDATA[
        python "$sparse_script" '$inputs'
        ]]>

            <param name="selected_function" type="select" label="Select a task:">
                <option value="vstack" selected="true">Stack sparse matrices vertically (vstack)</option>
                <option value="hstack">Stack sparse matrices horizontally (hstack)</option>
            </param>
            <when value="vstack">
                <expand macro="multiple_input" name="sparse_inputs" />
            </when>
            <when value="hstack">
                <expand macro="multiple_input" name="sparse_inputs" />
            </when>
        </conditional>
    </inputs>
    <outputs>
        <data format="txt" name="outfile" />
    </outputs>
    <tests>
        <test>
            <param name="selected_function" value="vstack" />
            <param name="sparse_inputs_0|input" value="csr_sparse1.mtx" ftype="txt" />
            <param name="sparse_inputs_1|input" value="csr_sparse2.mtx" ftype="txt" />
            <output name="outfile" file="csr_stack_result01.mtx" />
        </test>
        <test>
            <param name="selected_function" value="hstack" />
            <param name="sparse_inputs_0|input" value="csc_sparse1.mtx" ftype="txt" />
            <param name="sparse_inputs_1|input" value="csc_sparse2.mtx" ftype="txt" />
            <output name="outfile" file="csc_stack_result01.mtx" />
        </test>
    </tests>
    <help>
        <![CDATA[
**What it does**

**Parameters:** blocks sequence of sparse matrices with compatible shapes format. 

For more information please refer to  DOI:10.1109/MCSE.2011.37.
        ]]>
    </help>
    <expand macro="scipy_citation" />
</tool>