Mercurial > repos > bgruening > sklearn_data_preprocess
comparison pre_process.xml @ 23:d6b8103c909c draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 57f4407e278a615f47a377a3328782b1d8e0b54d
| author | bgruening |
|---|---|
| date | Sun, 30 Dec 2018 01:58:00 -0500 |
| parents | f156acc7239b |
| children | 9e43ee712723 |
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| 22:b0c31e126fa1 | 23:d6b8103c909c |
|---|---|
| 115 <param name="selected_column_selector_option" value="all_columns"/> | 115 <param name="selected_column_selector_option" value="all_columns"/> |
| 116 <param name="selected_input_type" value="tabular"/> | 116 <param name="selected_input_type" value="tabular"/> |
| 117 <param name="selected_pre_processor" value="KernelCenterer"/> | 117 <param name="selected_pre_processor" value="KernelCenterer"/> |
| 118 <param name="save" value="true"/> | 118 <param name="save" value="true"/> |
| 119 <output name="outfile_transform" file="prp_result01" ftype="tabular"/> | 119 <output name="outfile_transform" file="prp_result01" ftype="tabular"/> |
| 120 <output name="outfile_fit" file="prp_model01" ftype="zip" compare="sim_size" delta="500"/> | 120 <output name="outfile_fit" file="prp_model01" ftype="zip" compare="sim_size" delta="5"/> |
| 121 </test> | 121 </test> |
| 122 <test> | 122 <test> |
| 123 <param name="infile" value="train.tabular" ftype="tabular"/> | 123 <param name="infile" value="train.tabular" ftype="tabular"/> |
| 124 <param name="selected_column_selector_option" value="all_columns"/> | 124 <param name="selected_column_selector_option" value="all_columns"/> |
| 125 <param name="selected_input_type" value="tabular"/> | 125 <param name="selected_input_type" value="tabular"/> |
| 126 <param name="selected_pre_processor" value="MinMaxScaler"/> | 126 <param name="selected_pre_processor" value="MinMaxScaler"/> |
| 127 <param name="save" value="true"/> | 127 <param name="save" value="true"/> |
| 128 <output name="outfile_transform" file="prp_result02" ftype="tabular"/> | 128 <output name="outfile_transform" file="prp_result02" ftype="tabular"/> |
| 129 <output name="outfile_fit" file="prp_model02" ftype="zip" compare="sim_size" delta="500"/> | 129 <output name="outfile_fit" file="prp_model02" ftype="zip" compare="sim_size" delta="5"/> |
| 130 </test> | 130 </test> |
| 131 <test> | 131 <test> |
| 132 <param name="infile" value="train.tabular" ftype="tabular"/> | 132 <param name="infile" value="train.tabular" ftype="tabular"/> |
| 133 <param name="selected_column_selector_option" value="all_columns"/> | 133 <param name="selected_column_selector_option" value="all_columns"/> |
| 134 <param name="selected_input_type" value="tabular"/> | 134 <param name="selected_input_type" value="tabular"/> |
| 135 <param name="selected_pre_processor" value="PolynomialFeatures"/> | 135 <param name="selected_pre_processor" value="PolynomialFeatures"/> |
| 136 <param name="save" value="true"/> | 136 <param name="save" value="true"/> |
| 137 <output name="outfile_transform" file="prp_result03" ftype="tabular"/> | 137 <output name="outfile_transform" file="prp_result03" ftype="tabular"/> |
| 138 <output name="outfile_fit" file="prp_model03" ftype="zip" compare="sim_size" delta="500"/> | 138 <output name="outfile_fit" file="prp_model03" ftype="zip" compare="sim_size" delta="5"/> |
| 139 </test> | 139 </test> |
| 140 <test> | 140 <test> |
| 141 <param name="infile" value="train.tabular" ftype="tabular"/> | 141 <param name="infile" value="train.tabular" ftype="tabular"/> |
| 142 <param name="selected_column_selector_option" value="all_columns"/> | 142 <param name="selected_column_selector_option" value="all_columns"/> |
| 143 <param name="selected_input_type" value="tabular"/> | 143 <param name="selected_input_type" value="tabular"/> |
| 144 <param name="selected_pre_processor" value="RobustScaler"/> | 144 <param name="selected_pre_processor" value="RobustScaler"/> |
| 145 <param name="save" value="true"/> | 145 <param name="save" value="true"/> |
| 146 <output name="outfile_transform" file="prp_result04" ftype="tabular"/> | 146 <output name="outfile_transform" file="prp_result04" ftype="tabular"/> |
| 147 <output name="outfile_fit" file="prp_model04" ftype="zip" compare="sim_size" delta="500"/> | 147 <output name="outfile_fit" file="prp_model04" ftype="zip" compare="sim_size" delta="5"/> |
| 148 </test> | 148 </test> |
| 149 <test> | 149 <test> |
| 150 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> | 150 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> |
| 151 <param name="selected_input_type" value="sparse"/> | 151 <param name="selected_input_type" value="sparse"/> |
| 152 <param name="selected_pre_processor" value="Binarizer"/> | 152 <param name="selected_pre_processor" value="Binarizer"/> |
| 153 <param name="save" value="true"/> | 153 <param name="save" value="true"/> |
| 154 <output name="outfile_transform" file="prp_result05" ftype="tabular"/> | 154 <output name="outfile_transform" file="prp_result05" ftype="tabular"/> |
| 155 <output name="outfile_fit" file="prp_model05" ftype="zip" compare="sim_size" delta="500"/> | 155 <output name="outfile_fit" file="prp_model05" ftype="zip" compare="sim_size" delta="5"/> |
| 156 </test> | 156 </test> |
| 157 <test> | 157 <test> |
| 158 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> | 158 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> |
| 159 <param name="selected_input_type" value="sparse"/> | 159 <param name="selected_input_type" value="sparse"/> |
| 160 <param name="selected_pre_processor" value="Imputer"/> | 160 <param name="selected_pre_processor" value="Imputer"/> |
| 161 <param name="save" value="true"/> | 161 <param name="save" value="true"/> |
| 162 <param name="axis" value="true"/> | 162 <param name="axis" value="true"/> |
| 163 <output name="outfile_transform" file="prp_result06" ftype="tabular"/> | 163 <output name="outfile_transform" file="prp_result06" ftype="tabular"/> |
| 164 <output name="outfile_fit" file="prp_model06" ftype="zip" compare="sim_size" delta="500"/> | 164 <output name="outfile_fit" file="prp_model06" ftype="zip" compare="sim_size" delta="50"/> |
| 165 </test> | 165 </test> |
| 166 <test> | 166 <test> |
| 167 <param name="infile" value="train.tabular" ftype="tabular"/> | 167 <param name="infile" value="train.tabular" ftype="tabular"/> |
| 168 <param name="selected_input_type" value="tabular"/> | 168 <param name="selected_input_type" value="tabular"/> |
| 169 <param name="selected_column_selector_option" value="all_columns"/> | 169 <param name="selected_column_selector_option" value="all_columns"/> |
| 170 <param name="selected_pre_processor" value="StandardScaler"/> | 170 <param name="selected_pre_processor" value="StandardScaler"/> |
| 171 <param name="save" value="true"/> | 171 <param name="save" value="true"/> |
| 172 <output name="outfile_transform" file="prp_result07" ftype="tabular"/> | 172 <output name="outfile_transform" file="prp_result07" ftype="tabular"/> |
| 173 <output name="outfile_fit" file="prp_model07" ftype="zip" compare="sim_size" delta="500"/> | 173 <output name="outfile_fit" file="prp_model07" ftype="zip" compare="sim_size" delta="5"/> |
| 174 </test> | 174 </test> |
| 175 <test> | 175 <test> |
| 176 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> | 176 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> |
| 177 <param name="selected_input_type" value="sparse"/> | 177 <param name="selected_input_type" value="sparse"/> |
| 178 <param name="selected_pre_processor" value="MaxAbsScaler"/> | 178 <param name="selected_pre_processor" value="MaxAbsScaler"/> |
| 179 <param name="save" value="true"/> | 179 <param name="save" value="true"/> |
| 180 <output name="outfile_transform" file="prp_result08" ftype="tabular"/> | 180 <output name="outfile_transform" file="prp_result08" ftype="tabular"/> |
| 181 <output name="outfile_fit" file="prp_model08" ftype="zip" compare="sim_size" delta="500"/> | 181 <output name="outfile_fit" file="prp_model08" ftype="zip" compare="sim_size" delta="5"/> |
| 182 </test> | 182 </test> |
| 183 <test> | 183 <test> |
| 184 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> | 184 <param name="infile" value="csr_sparse2.mtx" ftype="txt"/> |
| 185 <param name="selected_input_type" value="sparse"/> | 185 <param name="selected_input_type" value="sparse"/> |
| 186 <param name="selected_pre_processor" value="Normalizer"/> | 186 <param name="selected_pre_processor" value="Normalizer"/> |
| 187 <param name="save" value="true"/> | 187 <param name="save" value="true"/> |
| 188 <output name="outfile_transform" file="prp_result09" ftype="tabular"/> | 188 <output name="outfile_transform" file="prp_result09" ftype="tabular"/> |
| 189 <output name="outfile_fit" file="prp_model09" ftype="zip" compare="sim_size" delta="500"/> | 189 <output name="outfile_fit" file="prp_model09" ftype="zip" compare="sim_size" delta="5"/> |
| 190 </test> | 190 </test> |
| 191 </tests> | 191 </tests> |
| 192 <help> | 192 <help> |
| 193 <![CDATA[ | 193 <![CDATA[ |
| 194 **What it does** | 194 **What it does** |