diff ensemble.xml @ 10:cd595710f0c0 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 97c4f22cdcfa6cddeeffc7b102c418a7ff12a888

--- a/ensemble.xml	Wed May 30 08:25:37 2018 -0400
+++ b/ensemble.xml	Tue Jun 05 06:46:22 2018 -0400
@@ -49,9 +49,15 @@
 input_type = params["selected_tasks"]["selected_algorithms"]["input_options"]["selected_input"]
 if input_type=="tabular":
     header = 'infer' if params["selected_tasks"]["selected_algorithms"]["input_options"]["header1"] else None
+    column_option = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_1"]["selected_column_selector_option"]
+    if column_option == "by_index_number":
+        c = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_1"]["col1"]
+    else:
+        c = None
     X = read_columns(
             "$selected_tasks.selected_algorithms.input_options.infile1",
-            "$selected_tasks.selected_algorithms.input_options.col1",
+            c = c,
+            c_option = column_option,
             sep='\t',
             header=header,
             parse_dates=True
@@ -60,9 +66,15 @@
     X = mmread(open("$selected_tasks.selected_algorithms.input_options.infile1", 'r'))
 
 header = 'infer' if params["selected_tasks"]["selected_algorithms"]["input_options"]["header2"] else None
+column_option = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_2"]["selected_column_selector_option2"]
+if column_option == "by_index_number":
+    c = params["selected_tasks"]["selected_algorithms"]["input_options"]["column_selector_options_2"]["col2"]
+else:
+    c = None
 y = read_columns(
         "$selected_tasks.selected_algorithms.input_options.infile2",
-        "$selected_tasks.selected_algorithms.input_options.col2",
+        c = c,
+        c_option = column_option,
         sep='\t',
         header=header,
         parse_dates=True
@@ -262,7 +274,7 @@
             <param name="infile1" value="regression_X.tabular" ftype="tabular"/>
             <param name="infile2" value="regression_y.tabular" ftype="tabular"/>
             <param name="header1" value="True"/>
-            <param name="col1" value="1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17"/>
+            <param name="selected_column_selector_option" value="all_columns"/>
             <param name="header2" value="True"/>
             <param name="col2" value="1"/>
             <param name="selected_task" value="train"/>