comparison generalized_linear.xml @ 24:b628de0d101f draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ab963ec9498bd05d2fb2f24f75adb2fccae7958c
author bgruening
date Wed, 15 May 2019 07:40:56 -0400
parents e3bc646e63b2
children 9d3a024cf2da
comparison
equal deleted inserted replaced
23:e3bc646e63b2 24:b628de0d101f
17 import sys 17 import sys
18 import json 18 import json
19 import numpy as np 19 import numpy as np
20 import sklearn.linear_model 20 import sklearn.linear_model
21 import pandas 21 import pandas
22 import pickle
22 from scipy.io import mmread 23 from scipy.io import mmread
23 24
24 with open("$__tool_directory__/sk_whitelist.json", "r") as f: 25 sys.path.insert(0, '$__tool_directory__')
25 sk_whitelist = json.load(f) 26 from utils import load_model, get_X_y
26 exec(open("$__tool_directory__/utils.py").read(), globals())
27 27
28 input_json_path = sys.argv[1] 28 input_json_path = sys.argv[1]
29 with open(input_json_path, "r") as param_handler: 29 with open(input_json_path, "r") as param_handler:
30 params = json.load(param_handler) 30 params = json.load(param_handler)
31 31