annotate test-data/get_params02.tabular @ 7:2be90d2f29a7 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 3c1e6c72303cfd8a5fd014734f18402b97f8ecb5
author bgruening
date Fri, 22 Sep 2023 17:27:09 +0000
parents 3b6ee54eb7e2
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
1 Parameter Value
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
2 * memory memory: None
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
3 * steps "steps: [('robustscaler', RobustScaler(copy=True, quantile_range=(25.0, 75.0), with_centering=True,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
4 with_scaling=True)), ('lassocv', LassoCV(alphas=None, copy_X=True, cv='warn', eps=0.001, fit_intercept=True,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
5 max_iter=1000, n_alphas=100, n_jobs=1, normalize=False, positive=False,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
6 precompute='auto', random_state=None, selection='cyclic', tol=0.0001,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
7 verbose=False))]"
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
8 @ robustscaler "robustscaler: RobustScaler(copy=True, quantile_range=(25.0, 75.0), with_centering=True,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
9 with_scaling=True)"
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
10 @ lassocv "lassocv: LassoCV(alphas=None, copy_X=True, cv='warn', eps=0.001, fit_intercept=True,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
11 max_iter=1000, n_alphas=100, n_jobs=1, normalize=False, positive=False,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
12 precompute='auto', random_state=None, selection='cyclic', tol=0.0001,
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
13 verbose=False)"
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
14 @ robustscaler__copy robustscaler__copy: True
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
15 @ robustscaler__quantile_range robustscaler__quantile_range: (25.0, 75.0)
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
16 @ robustscaler__with_centering robustscaler__with_centering: True
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
17 @ robustscaler__with_scaling robustscaler__with_scaling: True
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
18 @ lassocv__alphas lassocv__alphas: None
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
19 @ lassocv__copy_X lassocv__copy_X: True
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
20 @ lassocv__cv lassocv__cv: 'warn'
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
21 @ lassocv__eps lassocv__eps: 0.001
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
22 @ lassocv__fit_intercept lassocv__fit_intercept: True
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
23 @ lassocv__max_iter lassocv__max_iter: 1000
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
24 @ lassocv__n_alphas lassocv__n_alphas: 100
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
25 * lassocv__n_jobs lassocv__n_jobs: 1
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
26 @ lassocv__normalize lassocv__normalize: False
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
27 @ lassocv__positive lassocv__positive: False
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
28 @ lassocv__precompute lassocv__precompute: 'auto'
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
29 @ lassocv__random_state lassocv__random_state: None
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
30 @ lassocv__selection lassocv__selection: 'cyclic'
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
31 @ lassocv__tol lassocv__tol: 0.0001
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
32 * lassocv__verbose lassocv__verbose: False
3b6ee54eb7e2 "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ea12f973df4b97a2691d9e4ce6bf6fae59d57717"
bgruening
parents:
diff changeset
33 Note: @, searchable params in searchcv too.