Mercurial > repos > bgruening > sklearn_regression_metrics
comparison regression_metrics.xml @ 5:8608ee21a49b draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit cd4a8b019168acd5a513c57a1b1f380622f230f6
author | bgruening |
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date | Sun, 01 Jul 2018 03:20:47 -0400 |
parents | 64c87ceb6766 |
children | a31ecf372d60 |
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4:64c87ceb6766 | 5:8608ee21a49b |
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26 input_json_path = sys.argv[1] | 26 input_json_path = sys.argv[1] |
27 params = json.load(open(input_json_path, "r")) | 27 params = json.load(open(input_json_path, "r")) |
28 | 28 |
29 header='infer' if params["regression_metrics"]["header1"] else None | 29 header='infer' if params["regression_metrics"]["header1"] else None |
30 column_option = params["regression_metrics"]["column_selector_options_1"]["selected_column_selector_option"] | 30 column_option = params["regression_metrics"]["column_selector_options_1"]["selected_column_selector_option"] |
31 if column_option in ["by_index_number", "all_but_by_index_number"]: | 31 if column_option in ["by_index_number", "all_but_by_index_number", "by_header_name", "all_but_by_header_name"]: |
32 c = params["regression_metrics"]["column_selector_options_1"]["col1"] | 32 c = params["regression_metrics"]["column_selector_options_1"]["col1"] |
33 else: | 33 else: |
34 c = None | 34 c = None |
35 y_t = read_columns( | 35 y_t = read_columns( |
36 "$regression_metrics.infile1", | 36 "$regression_metrics.infile1", |
41 parse_dates=True | 41 parse_dates=True |
42 ) | 42 ) |
43 | 43 |
44 header='infer' if params["regression_metrics"]["header2"] else None | 44 header='infer' if params["regression_metrics"]["header2"] else None |
45 column_option = params["regression_metrics"]["column_selector_options_2"]["selected_column_selector_option2"] | 45 column_option = params["regression_metrics"]["column_selector_options_2"]["selected_column_selector_option2"] |
46 if column_option in ["by_index_number", "all_but_by_index_number"]: | 46 if column_option in ["by_index_number", "all_but_by_index_number", "by_header_name", "all_but_by_header_name"]: |
47 c = params["regression_metrics"]["column_selector_options_2"]["col2"] | 47 c = params["regression_metrics"]["column_selector_options_2"]["col2"] |
48 else: | 48 else: |
49 c = None | 49 c = None |
50 y_p = read_columns( | 50 y_p = read_columns( |
51 "$regression_metrics.infile2", | 51 "$regression_metrics.infile2", |