Mercurial > repos > bgruening > suite_hicexplorer

comparison repository_dependencies.xml @ 17:5280c27e184c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author bgruening
date Wed, 05 Feb 2020 20:04:03 -0500
parents d85f767c6a1f
children e0e646bb10ef
comparison
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16:d85f767c6a1f 17:5280c27e184c
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="HiCExplorer: Set of programs to process, analyze and visualize Hi-C data."> 2 <repositories description="HiCExplorer: Set of programs to process, analyze and visualize Hi-C data.">
3 <repository changeset_revision="6d76e532b669" name="hicexplorer_chicviewpoint" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 3 <repository changeset_revision="68c92dfd03d7" name="hicexplorer_chicviewpoint" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
4 <repository changeset_revision="f011486cbaaa" name="hicexplorer_hicvalidatelocations" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 4 <repository changeset_revision="619805cff065" name="hicexplorer_hicvalidatelocations" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
5 <repository changeset_revision="9949f055db84" name="hicexplorer_hiccorrectmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 5 <repository changeset_revision="1e622e371512" name="hicexplorer_hiccorrectmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
6 <repository changeset_revision="34dc1acfcc62" name="hicexplorer_hicplotdistvscounts" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 6 <repository changeset_revision="b289857588f9" name="hicexplorer_hicplotdistvscounts" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
7 <repository changeset_revision="b4b8343dd681" name="hicexplorer_hicpca" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 7 <repository changeset_revision="3ed8e85f4f4c" name="hicexplorer_hicpca" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
8 <repository changeset_revision="708e1b8eff5c" name="hicexplorer_hicinfo" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 8 <repository changeset_revision="ca97d2b2b59e" name="hicexplorer_hicinfo" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
9 <repository changeset_revision="fa6fc09ba259" name="hicexplorer_chicdifferentialtest" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 9 <repository changeset_revision="7ec5229e2a19" name="hicexplorer_chicdifferentialtest" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
10 <repository changeset_revision="f7c0aedd4be3" name="hicexplorer_hicaverageregions" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 10 <repository changeset_revision="d4aa0255c1eb" name="hicexplorer_hicaverageregions" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
11 <repository changeset_revision="ebe2b2d82a32" name="hicexplorer_hicplotaverageregions" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 11 <repository changeset_revision="5ae69a0a33bf" name="hicexplorer_hicplotaverageregions" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
12 <repository changeset_revision="e89bc5e38823" name="hicexplorer_hicsummatrices" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 12 <repository changeset_revision="c08c07412bd0" name="hicexplorer_hicsummatrices" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
13 <repository changeset_revision="8d764e8acdf5" name="hicexplorer_hiccompartmentspolarization" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 13 <repository changeset_revision="f922a8d5e897" name="hicexplorer_hicaggregatecontacts" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
14 <repository changeset_revision="ce16a538ab46" name="hicexplorer_hicaggregatecontacts" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 14 <repository changeset_revision="3b15581e7ca7" name="hicexplorer_hicconvertformat" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
15 <repository changeset_revision="e136f22c2a0f" name="hicexplorer_hicconvertformat" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 15 <repository changeset_revision="aeb4f3e6678d" name="hicexplorer_hicmergeloops" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
16 <repository changeset_revision="49b82255b72f" name="hicexplorer_hicmergeloops" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 16 <repository changeset_revision="91abc3b2e948" name="hicexplorer_chicviewpointbackgroundmodel" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
17 <repository changeset_revision="bd11c6a972ef" name="hicexplorer_chicviewpointbackgroundmodel" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 17 <repository changeset_revision="ea297a9c6f11" name="hicexplorer_hicadjustmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
18 <repository changeset_revision="74b3932d0836" name="hicexplorer_hicadjustmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 18 <repository changeset_revision="c6f32406aa3c" name="hicexplorer_hiccompartmentspolarization" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
19 <repository changeset_revision="55b4b8bc250d" name="hicexplorer_hiccomparematrices" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 19 <repository changeset_revision="a54c1b5698fa" name="hicexplorer_hiccomparematrices" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
20 <repository changeset_revision="ee745fbe9f14" name="hicexplorer_chicaggregatestatistic" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 20 <repository changeset_revision="1baccff6ffb4" name="hicexplorer_chicaggregatestatistic" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
21 <repository changeset_revision="8339f6708553" name="hicexplorer_hicfindrestrictionsites" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 21 <repository changeset_revision="fc0667d83f7c" name="hicexplorer_hicfindrestrictionsites" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
22 <repository changeset_revision="2f279a01f3ff" name="hicexplorer_chicsignificantinteractions" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 22 <repository changeset_revision="1db84db797b1" name="hicexplorer_chicsignificantinteractions" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
23 <repository changeset_revision="269c4246279d" name="hicexplorer_hicquickqc" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 23 <repository changeset_revision="b599d3000966" name="hicexplorer_hicquickqc" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
24 <repository changeset_revision="e89d515c3594" name="hicexplorer_hiccorrelate" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 24 <repository changeset_revision="5fe7376d9ff0" name="hicexplorer_hiccorrelate" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
25 <repository changeset_revision="ae8bf5420df2" name="hicexplorer_chicplotviewpoint" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 25 <repository changeset_revision="61e2d34c5b99" name="hicexplorer_chicplotviewpoint" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
26 <repository changeset_revision="ae9cc6dbfaca" name="hicexplorer_hictransform" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 26 <repository changeset_revision="3f529510975e" name="hicexplorer_hictransform" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
27 <repository changeset_revision="5e9c304c424c" name="hicexplorer_hicplotviewpoint" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 27 <repository changeset_revision="d5c24ac2da6e" name="hicexplorer_hicplotviewpoint" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
28 <repository changeset_revision="000ddd5f0f82" name="hicexplorer_chicqualitycontrol" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 28 <repository changeset_revision="feb7f62a0ff9" name="hicexplorer_chicqualitycontrol" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
29 <repository changeset_revision="4b85ea34afae" name="hicexplorer_hicbuildmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 29 <repository changeset_revision="76b189fd277b" name="hicexplorer_hicbuildmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
30 <repository changeset_revision="40b33e101621" name="hicexplorer_hicplotmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 30 <repository changeset_revision="fe13295d0329" name="hicexplorer_hicplotmatrix" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
31 <repository changeset_revision="49c8055f6830" name="hicexplorer_hicmergematrixbins" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 31 <repository changeset_revision="faab8edcaac9" name="hicexplorer_hicmergematrixbins" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
32 <repository changeset_revision="4f36f2d51d33" name="hicexplorer_hicnormalize" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 32 <repository changeset_revision="483e507c8d42" name="hicexplorer_hicnormalize" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
33 <repository changeset_revision="6b7987d22eab" name="hicexplorer_hicfindtads" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 33 <repository changeset_revision="d3fad161b318" name="hicexplorer_hicfindtads" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
34 <repository changeset_revision="2d1f9759fa0e" name="hicexplorer_hicdetectloops" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 34 <repository changeset_revision="5759cd7db0d1" name="hicexplorer_hicdetectloops" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
35 <repository changeset_revision="450605e43e25" name="hicexplorer_hicplotsvl" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/> 35 <repository changeset_revision="ec91f79c59bb" name="hicexplorer_hicplotsvl" owner="bgruening" toolshed="https://toolshed.g2.bx.psu.edu"/>
36 </repositories> 36 </repositories>