comparison grep.xml @ 1:43b1f073b693 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 369e40078146d00608d52205bb8cee66ae735b76-dirty
author bgruening
date Tue, 30 Jun 2015 16:23:23 -0400
parents 5314e5d6f040
children 37e1eb05b1b4
comparison
equal deleted inserted replaced
0:5314e5d6f040 1:43b1f073b693
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"> 6 <expand macro="requirements">
7 <requirement type="package" version="2.14">gnu_grep</requirement> 7 <requirement type="package" version="2.14">gnu_grep</requirement>
8 <requirement type="set_environment">TP_SCRIPT_PATH</requirement>
9 </expand> 8 </expand>
10 <version_command>grep --version | head -n 1</version_command> 9 <version_command>grep --version | head -n 1</version_command>
11 <command> 10 <command>
12 <![CDATA[ 11 <![CDATA[
13 #if str($color) == "COLOR": 12 #if str($color) == "COLOR":
18 -A $lines_after 17 -A $lines_after
19 -B $lines_before 18 -B $lines_before
20 $invert 19 $invert
21 $case_sensitive 20 $case_sensitive
22 -- "${url_paste}" 21 -- "${url_paste}"
23 '${infile}' | \$TP_SCRIPT_PATH/ansi2html.sh > "${output}" 22 '${infile}' | $__tool_directory__/ansi2html.sh > "${output}"
24 #else: 23 #else:
25 grep 24 grep
26 -P 25 -P
27 -A $lines_after 26 -A $lines_after
28 -B $lines_before 27 -B $lines_before