diff sorted_uniq.xml @ 19:12615d397df7 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 70980e329cd9fa78e74bf14a76fd4ded9bd2b91f

--- a/sorted_uniq.xml	Sat Oct 08 21:01:33 2022 +0000
+++ b/sorted_uniq.xml	Thu Feb 29 22:15:20 2024 +0000
@@ -1,10 +1,11 @@
-<tool id="tp_uniq_tool" name="Unique lines" version="@BASE_VERSION@.1">
+<tool id="tp_uniq_tool" name="Unique lines" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>assuming sorted input file</description>
     <macros>
         <import>macros.xml</import>
     </macros>
+    <expand macro="creator"/>
     <expand macro="requirements">
-        <requirement type="package" version="4.4">sed</requirement>
+        <requirement type="package" version="4.8">sed</requirement>
     </expand>
     <version_command>uniq --version | head -n 1</version_command>
     <command>
@@ -23,14 +24,14 @@
                 $grouping.uniqueonly
             #end if
 
-            "$infile"
+            '$infile'
 
             #if $grouping.grouping_select == 'no' and $grouping.count:
                 ## count will print the count with spaces in front of the line and
                 ## with a space (not a tab) after the number, we need to cahnge that
                 | sed -e 's/ *//' -e 's/ /\t/'
             #end if
-            > "$outfile"
+            > '$outfile'
 ]]>
     </command>
     <inputs>
@@ -99,7 +100,6 @@
 
 You can sort your file using either the "Sort" tool in "Filter and Sort", or the "Sort" tool in "Unix Tools".
 
-@REFERENCES@
 ]]>
     </help>
     <expand macro="citations" />