Mercurial > repos > bgruening > text_processing
diff unfold_column.py @ 3:37e1eb05b1b4 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 10052765d6b712cf7d38356af4251fcc38a339b6-dirty
author | bgruening |
---|---|
date | Fri, 26 Feb 2016 12:22:19 -0500 |
parents | 5314e5d6f040 |
children | f46f0e4f75c4 |
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--- a/unfold_column.py Tue Jun 30 17:47:23 2015 -0400 +++ b/unfold_column.py Fri Feb 26 12:22:19 2016 -0500 @@ -4,11 +4,16 @@ out = open(sys.argv[4], 'w+') +sep = sys.argv[3] +# un-sanitize Galaxy inputs +if sep == 'X': + sep = ';' + with open(sys.argv[1]) as handle: for line in handle: cols = line.split('\t') unfolding_column = int(sys.argv[2]) - 1 column_content = cols[ unfolding_column ] - for elem in column_content.split( sys.argv[3] ): + for elem in column_content.split( sep ): out.write( '\t'.join( cols[:unfolding_column] + [elem] + cols[unfolding_column+1:]) ) out.close()