diff unfold_column.xml @ 0:5314e5d6f040 draft

Imported from capsule None

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/unfold_column.xml	Thu Jan 29 07:53:17 2015 -0500
@@ -0,0 +1,63 @@
+<tool id="tp_unfold_column_tool" name="Unfold" version="@BASE_VERSION@.0">
+    <description>columns from a table</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements" />
+    <command interpreter="python">
+<![CDATA[
+        unfold_column.py
+            '${infile}'
+            $column
+            "$delimiter"
+            '${outfile}'
+]]>
+    </command>
+    <inputs>
+        <param name="infile" format="tabular" type="data" label="File to unfold" />
+        <param name="column" type="data_column" data_ref="infile" accept_default="true" label="Column to use for unfolding" />
+        <param name="delimiter" type="select" label="Values in column are delimited by">
+            <option value=" ">Whitespace</option>
+            <option value=".">Dot</option>
+            <option value=",">Comma</option>
+            <option value="-">Dash</option>
+            <option value="_">Underscore</option>
+            <option value="|">Pipe</option>
+        </param>
+    </inputs>
+    <outputs>
+        <data name="outfile" format_source="infile" metadata_source="infile" />
+    </outputs>
+    <tests>
+        <test>
+            <param name="infile" value="unfold_column1.tabular" ftype="tabular"/>
+            <param name="delimiter" value=" "/>
+            <param name="column" value="3"/>
+            <output name="outfile" file="unfold_column_result1.tabular" ftype="tabular"/>
+        </test>
+    </tests>
+    <help>
+<![CDATA[
+**What it does**
+
+This tool will unfold one column of your input dataset.
+
+-----
+
+Input Example::
+
+    a	b	1,2,3,4,5	c
+
+
+Output Example::
+
+    a	b	1	c
+    a	b	2	c
+    a	b	3	c
+    a	b	4	c
+    a	b	5	c
+
+@REFERENCES@
+]]>
+  </help>
+</tool>