Mercurial > repos > bgruening > text_processing
view unfold_column.py @ 19:12615d397df7 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/text_processing/text_processing commit 70980e329cd9fa78e74bf14a76fd4ded9bd2b91f
author | bgruening |
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date | Thu, 29 Feb 2024 22:15:20 +0000 |
parents | f46f0e4f75c4 |
children |
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#!/usr/bin/env python import sys out = open(sys.argv[4], "w+") sep = sys.argv[3] # un-sanitize Galaxy inputs if sep == "X": sep = ";" with open(sys.argv[1]) as handle: for line in handle: cols = line.split("\t") unfolding_column = int(sys.argv[2]) - 1 column_content = cols[unfolding_column] for elem in column_content.split(sep): out.write( "\t".join( cols[:unfolding_column] + [elem] + cols[unfolding_column + 1:] ) ) out.close()