comparison test-data/sanger_full_range_report_results1.txt @ 4:2c1f0fe810f7 draft

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4:2c1f0fe810f7

SUMMARISING RUN PARAMETERS
==========================
Input filename: ./input_singles
Trimming mode: single-end
Trim Galore version: 0.3.7
Quality Phred score cutoff: 20
Quality encoding type selected: ASCII+33
Adapter sequence: 'AGATCGGAAGAGC'
Maximum trimming error rate: 0.1 (default)
Minimum required adapter overlap (stringency): 1 bp
Minimum required sequence length before a sequence gets removed: 20 bp


cutadapt version 1.1
Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a AGATCGGAAGAGC ./input_singles
Maximum error rate: 10.00%
   Processed reads: 2
     Trimmed reads: 1 ( 50.0%)
   Total basepairs:          168 (0.0 Mbp)
 Trimmed basepairs:            1 (0.0 Mbp) (0.60% of total)
   Too short reads: 0 (  0.0% of processed reads)
    Too long reads: 0 (  0.0% of processed reads)
        Total time:      0.00 s
     Time per read:      0.32 ms

=== Adapter 1 ===

Adapter 'AGATCGGAAGAGC', length 13, was trimmed 1 times.

Lengths of removed sequences
length	count	expected
1	1	0.5


RUN STATISTICS FOR INPUT FILE: ./input_singles
=============================================
2 sequences processed in total
Sequences removed because they became shorter than the length cutoff of 20 bp:	0 (0.0%)