diff test-data/paired_example_results2.txt @ 10:b4e39d993fc8 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/trim_galore commit bbef69cc08154b5c156c25f9ca43df0915803856

--- a/test-data/paired_example_results2.txt	Thu Mar 16 13:48:46 2017 -0400
+++ b/test-data/paired_example_results2.txt	Thu Apr 20 09:14:30 2017 -0400
@@ -1,7 +1,7 @@
 
 SUMMARISING RUN PARAMETERS
 ==========================
-Input filename: ./input_mate1
+Input filename: input_1.fastq
 Trimming mode: paired-end
 Trim Galore version: 0.4.0
 Cutadapt version: 1.8
@@ -13,8 +13,8 @@
 Minimum required sequence length for both reads before a sequence pair gets removed: 20 bp
 
 
-This is cutadapt 1.8 with Python 2.7.9
-Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a CTGTCTCTTATA ./input_mate1
+This is cutadapt 1.8 with Python 3.5.3
+Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a CTGTCTCTTATA input_1.fastq
 Trimming 1 adapter(s) with at most 10.0% errors in single-end mode ...
 Finished in 0.10 s (1010 us/read; 0.06 M reads/minute).
 
@@ -74,14 +74,14 @@
 86	1	0.0	1	1
 
 
-RUN STATISTICS FOR INPUT FILE: ./input_mate1
+RUN STATISTICS FOR INPUT FILE: input_1.fastq
 =============================================
 99 sequences processed in total
 
 
 SUMMARISING RUN PARAMETERS
 ==========================
-Input filename: ./input_mate2
+Input filename: input_2.fastq
 Trimming mode: paired-end
 Trim Galore version: 0.4.0
 Cutadapt version: 1.8
@@ -93,8 +93,8 @@
 Minimum required sequence length for both reads before a sequence pair gets removed: 20 bp
 
 
-This is cutadapt 1.8 with Python 2.7.9
-Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a CTGTCTCTTATA ./input_mate2
+This is cutadapt 1.8 with Python 3.5.3
+Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a CTGTCTCTTATA input_2.fastq
 Trimming 1 adapter(s) with at most 10.0% errors in single-end mode ...
 Finished in 0.10 s (1000 us/read; 0.06 M reads/minute).
 
@@ -157,7 +157,7 @@
 80	1	0.0	1	1
 
 
-RUN STATISTICS FOR INPUT FILE: ./input_mate2
+RUN STATISTICS FOR INPUT FILE: input_2.fastq
 =============================================
 100 sequences processed in total