Mercurial > repos > big-tiandm > degseq

view DEGseq_2.xml @ 5:18064ec7efe4 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author big-tiandm
date Thu, 30 Oct 2014 04:55:26 -0400
parents 794bb34e58d4
children 7a94f0a9f1c4
line wrap: on
line source

<tool id="degseq" name="degseq" veision="1.0.0">
  <description>tool for degseq analisis</description>
  <requirements>
    <requirement type="set_environment">SCRIPT_PATH</requirement>
    <requirement type="package" version="3.0.1">R</requirement>
    <requirement type="package" version="1.20.0">degseq</requirement>
  </requirements>


 <command interpreter="perl">DEGseq_2.pl -i $input   -column1 4 -mark1 A -column2 5 -mark2 B
 </command>

  <inputs>
     <param name="input"  type="data" label="input file"/>
  </inputs>

  <outputs>
     <data format="txt" name="deg" from_work_dir="output_score.txt" label="${tool.name} on ${on_string}: deg"/>
  </outputs>
 <help>

 </help>
 </tool>