Mercurial > repos > big-tiandm > mirplant2
directory / @ 52:8b8c356e6db5 draft
| name | size | permissions |
|---|---|---|
 tool-data/
|
drwxr-xr-x | |
 Annotate.pl
|
4182 | -rwxr-xr-x |
|
ClassAnnotate.pl
|
5983 | -rwxr-xr-x |
|
DEGseq_2.pl
|
2361 | -rwxr-xr-x |
|
Length_Distibution.pl
|
8774 | -rwxr-xr-x |
|
SampleDEGseqMerge.pl
|
1901 | -rwxr-xr-x |
|
collapseReads2Tags.pl
|
3569 | -rwxr-xr-x |
|
conventional.pl
|
3814 | -rwxr-xr-x |
|
convert_bowtie_to_blast.pl
|
3218 | -rwxr-xr-x |
|
count_ref_length.pl
|
924 | -rwxr-xr-x |
|
count_rfam_express.pl
|
25838 | -rwxr-xr-x |
|
filterReadsByCount.pl
|
2632 | -rwxr-xr-x |
|
filterReadsByLength.pl
|
2688 | -rwxr-xr-x |
|
get_genelist.pl
|
1109 | -rwxr-xr-x |
|
html_preprocess.pl
|
8023 | -rwxr-xr-x |
|
html_siRNA.pl
|
17131 | -rwxr-xr-x |
|
install_DEG.R
|
64 | -rwxr-xr-x |
|
matching.pl
|
2563 | -rwxr-xr-x |
|
miRDeep_plant.pl
|
42380 | -rwxr-xr-x |
|
miRNA_Express_and_sequence.pl
|
4355 | -rwxr-xr-x |
|
miRPlant.pl
|
16234 | -rwxr-xr-x |
|
miRPlant.xml
|
9030 | -rwxr-xr-x |
|
microRNA.pl
|
8122 | -rwxr-xr-x |
|
microRNA.xml
|
6275 | -rwxr-xr-x |
|
nibls.pl
|
8439 | -rwxr-xr-x |
|
non_miRNA_reads.pl
|
959 | -rwxr-xr-x |
|
phased_siRNA.pl
|
4423 | -rwxr-xr-x |
|
preProcess.pl
|
11251 | -rwxr-xr-x |
|
preProcess.xml
|
7830 | -rwxr-xr-x |
|
precursors.pl
|
19944 | -rwxr-xr-x |
|
quantify.pl
|
14212 | -rwxr-xr-x |
|
quantify_siRNA.pl
|
1401 | -rwxr-xr-x |
|
rfam.pl
|
2465 | -rwxr-xr-x |
|
sRNA_plot.pl
|
14092 | -rwxr-xr-x |
|
sam2Bed_bowtie.pl
|
1620 | -rwxr-xr-x |
|
siRNA.pl
|
12650 | -rwxr-xr-x |
|
siRNA.xml
|
5268 | -rwxr-xr-x |
|
siRNA_pipeline.pl
|
17259 | -rwxr-xr-x |
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siRNA_pipeline.xml
|
7281 | -rwxr-xr-x |
|
tool_data_table_conf.xml.sample
|
392 | -rwxr-xr-x |
|
tool_dependencies.xml
|
4959 | -rw-r--r-- |