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date Thu, 04 Sep 2025 23:54:26 +0000
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1 # Official repository for the COBRAxy toolset
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2 > COBRAxy (COBRApy in Galaxy) is a user-friendly tool that allows a user to user to characterize and to graphically compare simulated fluxomics coming from groups of samples with different transcriptional regulation of metabolism.
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3 It extends the MaREA 2 (Metabolic Reaction Enrichment Analysis) tool that enables users to compare groups in terms of RAS and RPS only. The tool is available as plug-in for the widely-used Galaxy platform for comparative genomics and bioinformatics analyses.
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5 ## Useful links:
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6 - COBRAxy Google Summer of Code 2024: https://summerofcode.withgoogle.com/programs/2024/projects/LSrCKfq7
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7 - COBRApy: https://opencobra.github.io/cobrapy/
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8 - MaREA4Galaxy: https://galaxyproject.org/use/marea4galaxy/
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9 - Galaxy project: https://usegalaxy.org/
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11 ## Documentation: