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* [Installation](installation.md)

* [Tutorials](tutorials/)
  * [Galaxy Setup](tutorials/galaxy-setup.md)
  * [Python API](tutorials/python-api.md)

* [Tools Documentation](tools/)
  * [RAS Generator](tools/ras-generator.md)
  * [RPS Generator](tools/rps-generator.md)
  * [MAREA](tools/marea.md)
  * [RAS to Bounds](tools/ras-to-bounds.md)
  * [Flux Simulation](tools/flux-simulation.md)
  * [Flux to Map](tools/flux-to-map.md)
  * [Model Setting](tools/metabolic-model-setting.md)
  * [Tabular to Model](tools/tabular-to-model.md)
  * [MAREA Cluster](tools/marea-cluster.md)