Mercurial > repos > bimib > cobraxy
comparison COBRAxy/ras_to_bounds.py @ 209:00a66b9bc29e draft
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| author | luca_milaz |
|---|---|
| date | Thu, 28 Nov 2024 13:51:23 +0000 |
| parents | 3fca9b568faf |
| children | b162b98f9de5 |
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| 208:c2aa3034aac2 | 209:00a66b9bc29e |
|---|---|
| 228 warning(error_message) | 228 warning(error_message) |
| 229 raise ValueError(error_message) | 229 raise ValueError(error_message) |
| 230 pass | 230 pass |
| 231 ras_class_names = [] | 231 ras_class_names = [] |
| 232 for file in ras_file_names: | 232 for file in ras_file_names: |
| 233 ras_class_names.append(file.split(".")[0]) | 233 ras_class_names.append(file.rsplit(".", 1)[0]) |
| 234 ras_list = [] | 234 ras_list = [] |
| 235 class_assignments = pd.DataFrame(columns=["Patient_ID", "Class"]) | 235 class_assignments = pd.DataFrame(columns=["Patient_ID", "Class"]) |
| 236 for ras_matrix, ras_class_name in zip(ras_file_list, ras_class_names): | 236 for ras_matrix, ras_class_name in zip(ras_file_list, ras_class_names): |
| 237 ras = read_dataset(ras_matrix, "ras dataset") | 237 ras = read_dataset(ras_matrix, "ras dataset") |
| 238 ras.replace("None", None, inplace=True) | 238 ras.replace("None", None, inplace=True) |
