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comparison COBRAxy/utils/reaction_parsing.py @ 381:0a3ca20848f3 draft

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author francesco_lapi
date Fri, 05 Sep 2025 09:18:26 +0000
parents 41f35c2f0c7b
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380:03a7ba63813f 381:0a3ca20848f3
122 customReactionsPath : path to the reactions information file. 122 customReactionsPath : path to the reactions information file.
123 123
124 Returns: 124 Returns:
125 ReactionsDict : dictionary encoding custom reactions information. 125 ReactionsDict : dictionary encoding custom reactions information.
126 """ 126 """
127 reactionsData :Dict[str, str] = {row[0]: row[1] for row in utils.readCsv(utils.FilePath.fromStrPath(customReactionsPath))} 127 reactionsData :Dict[str, str] = {row[0]: row[1] for row in utils.readCsv(utils.FilePath.fromStrPath(customReactionsPath), delimiter = "\t")}
128
129 return create_reaction_dict(reactionsData) 128 return create_reaction_dict(reactionsData)
130 129