comparison COBRAxy/utils/general_utils.py @ 391:4e53b178031a draft

Uploaded

390:a2dee883176e

        except Exception as e: raise DataErr(file_path, e.__str__())
        raise DataErr(file_path,
            f"Fomat \"{file_path.ext}\" is not recognized, only JSON, XML, MAT and YAML (.yml) files are supported.")
    

    def extract_model(file_path:FilePath, ext :FileFormat, model_encoding:Literal["json", "mat", "yml"]) -> cobra.Model:
        """
        Extract JSON, MAT and YAML COBRA model from a compressed file (zip, gz, bz2).
        
        Args:
            file_path: File path of the model

391:4e53b178031a

        except Exception as e: raise DataErr(file_path, e.__str__())
        raise DataErr(file_path,
            f"Fomat \"{file_path.ext}\" is not recognized, only JSON, XML, MAT and YAML (.yml) files are supported.")
    

    def extract_model(self, file_path:FilePath, ext :FileFormat, model_encoding:Literal["json", "mat", "yml"]) -> cobra.Model:
        """
        Extract JSON, MAT and YAML COBRA model from a compressed file (zip, gz, bz2).
        
        Args:
            file_path: File path of the model