comparison COBRAxy/src/rps_generator.py @ 543:5d5583dc6082 draft

Uploaded

542:fcdbc81feb45

maps metabolite names via synonyms, fills missing metabolites, and computes RPS
per reaction for each sample using a log-normalized formula.
"""
import math
import argparse

import numpy  as np
import pickle as pk
import pandas as pd

from typing import Optional, List, Dict

543:5d5583dc6082

maps metabolite names via synonyms, fills missing metabolites, and computes RPS
per reaction for each sample using a log-normalized formula.
"""
import math
import argparse
import os
import numpy  as np
import pickle as pk
import pandas as pd

from typing import Optional, List, Dict