Mercurial > repos > bimib > cobraxy

comparison COBRAxy/ras_generator.py @ 256:75804fbc338b draft

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Uploaded
author francesco_lapi
date Tue, 04 Mar 2025 15:00:16 +0000
parents 3fca9b568faf
children bb4e43663c69
comparison
equal deleted inserted replaced
255:9f78303dbd88 256:75804fbc338b
230 elif args.rules_selector == 'Recon': 230 elif args.rules_selector == 'Recon':
231 gene_in_rule = pk.load(open(args.tool_dir + '/local/pickle files/Recon_genes.p', 'rb')) 231 gene_in_rule = pk.load(open(args.tool_dir + '/local/pickle files/Recon_genes.p', 'rb'))
232 232
233 elif args.rules_selector == 'ENGRO2': 233 elif args.rules_selector == 'ENGRO2':
234 gene_in_rule = pk.load(open(args.tool_dir + '/local/pickle files/ENGRO2_genes.p', 'rb')) 234 gene_in_rule = pk.load(open(args.tool_dir + '/local/pickle files/ENGRO2_genes.p', 'rb'))
235 print(gene_in_rule)
235 print(f"{args.tool_dir}'/local/pickle files/ENGRO2_genes.p'") 236 print(f"{args.tool_dir}'/local/pickle files/ENGRO2_genes.p'")
236 utils.logWarning(f"{args.tool_dir}'/local/pickle files/ENGRO2_genes.p'", ARGS.out_log) 237 utils.logWarning(f"{args.tool_dir}'/local/pickle files/ENGRO2_genes.p'", ARGS.out_log)
237 print(args.rules_selector) 238 print(args.rules_selector)
238 gene_in_rule = gene_in_rule.get(type_gene) 239 gene_in_rule = gene_in_rule.get(type_gene)
239 240