Mercurial > repos > bimib > cobraxy
comparison COBRAxy/ras_generator.py @ 402:ccccb731c953 draft
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| author | francesco_lapi |
|---|---|
| date | Sun, 07 Sep 2025 21:16:26 +0000 |
| parents | 6c7ddf68381a |
| children | 187cee1a00e2 |
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| 401:6c7ddf68381a | 402:ccccb731c953 |
|---|---|
| 26 parser = argparse.ArgumentParser( | 26 parser = argparse.ArgumentParser( |
| 27 usage = '%(prog)s [options]', | 27 usage = '%(prog)s [options]', |
| 28 description = "process some value's genes to create a comparison's map.") | 28 description = "process some value's genes to create a comparison's map.") |
| 29 | 29 |
| 30 parser.add_argument("-rl", "--model_upload", type = str, | 30 parser.add_argument("-rl", "--model_upload", type = str, |
| 31 help = "path to input file with custom rules, if provided") | 31 help = "path to input file containing the rules") |
| 32 | 32 |
| 33 parser.add_argument("-rn", "--model_upload_name", type = str, help = "custom rules name") | 33 parser.add_argument("-rn", "--model_upload_name", type = str, help = "custom rules name") |
| 34 # ^ I need this because galaxy converts my files into .dat but I need to know what extension they were in | 34 # ^ I need this because galaxy converts my files into .dat but I need to know what extension they were in |
| 35 | 35 |
| 36 parser.add_argument( | 36 parser.add_argument( |