comparison COBRAxy/flux_to_map.py @ 274:d54d6728b204 draft

Uploaded

273:99703bcaa290

        try: 
            p_value, z_score = computePValue(l1, l2)
            avg1 = sum(l1) / len(l1)
            avg2 = sum(l2) / len(l2)
            f_c = fold_change(avg1, avg2)
            if not isinstance(z_score, str) and max_z_score < abs(z_score): max_z_score = abs(z_score)
            
            tmp[reactId] = [float(p_value), f_c, z_score, avg1, avg2]
        except (TypeError, ZeroDivisionError): continue
    

274:d54d6728b204

        try: 
            p_value, z_score = computePValue(l1, l2)
            avg1 = sum(l1) / len(l1)
            avg2 = sum(l2) / len(l2)
            f_c = fold_change(avg1, avg2)
            if math.isnan(p_value) or (isinstance(f_c, float) and math.isnan(f_c)): continue
            if not isinstance(z_score, str) and max_z_score < abs(z_score): max_z_score = abs(z_score)
            
            tmp[reactId] = [float(p_value), f_c, z_score, avg1, avg2]
        except (TypeError, ZeroDivisionError): continue