Mercurial > repos > bimib > cobraxy
comparison COBRAxy/flux_simulation.py @ 160:e1b0ddc770a9 draft
Uploaded
| author | francesco_lapi |
|---|---|
| date | Tue, 12 Nov 2024 17:05:33 +0000 |
| parents | 898f2641d3f7 |
| children | 9159e12b03fa |
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| 159:898f2641d3f7 | 160:e1b0ddc770a9 |
|---|---|
| 112 print(s) | 112 print(s) |
| 113 | 113 |
| 114 | 114 |
| 115 def write_to_file(dataset: pd.DataFrame, name: str, keep_index:bool=False)->None: | 115 def write_to_file(dataset: pd.DataFrame, name: str, keep_index:bool=False)->None: |
| 116 dataset.index.name = 'Reactions' | 116 dataset.index.name = 'Reactions' |
| 117 print(ARGS.output_path + name + ".csv") | |
| 117 dataset.to_csv(ARGS.output_path + name + ".csv", sep = '\t', index = keep_index) | 118 dataset.to_csv(ARGS.output_path + name + ".csv", sep = '\t', index = keep_index) |
| 118 | 119 |
| 119 ############################ dataset input #################################### | 120 ############################ dataset input #################################### |
| 120 def read_dataset(data :str, name :str) -> pd.DataFrame: | 121 def read_dataset(data :str, name :str) -> pd.DataFrame: |
| 121 """ | 122 """ |
