Mercurial > repos > bimib > cobraxy
comparison COBRAxy/utils/model_utils.py @ 448:f8b1761eee37 draft
Uploaded
| author | francesco_lapi |
|---|---|
| date | Thu, 11 Sep 2025 10:30:49 +0000 |
| parents | 06564187fba3 |
| children | 4e2bc80764b6 |
comparison
equal
deleted
inserted
replaced
| 447:be26d1c603a0 | 448:f8b1761eee37 |
|---|---|
| 182 | 182 |
| 183 print(f"Costruendo modello da {len(df)} reazioni...") | 183 print(f"Costruendo modello da {len(df)} reazioni...") |
| 184 | 184 |
| 185 # Prima passata: estrai metaboliti e compartimenti dalle formule delle reazioni | 185 # Prima passata: estrai metaboliti e compartimenti dalle formule delle reazioni |
| 186 for idx, row in df.iterrows(): | 186 for idx, row in df.iterrows(): |
| 187 reaction_formula = str(row['Reaction']).strip() | 187 reaction_formula = str(row['Formula']).strip() |
| 188 if not reaction_formula or reaction_formula == 'nan': | 188 if not reaction_formula or reaction_formula == 'nan': |
| 189 continue | 189 continue |
| 190 | 190 |
| 191 # Estrai metaboliti dalla formula della reazione | 191 # Estrai metaboliti dalla formula della reazione |
| 192 metabolites = extract_metabolites_from_reaction(reaction_formula) | 192 metabolites = extract_metabolites_from_reaction(reaction_formula) |