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comparison COBRAxy/docs/tools/flux-simulation.md @ 542:fcdbc81feb45 draft

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author francesco_lapi
date Sun, 26 Oct 2025 19:27:41 +0000
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541:fa93040a75af 542:fcdbc81feb45
298 298
299 ## Integration Workflow 299 ## Integration Workflow
300 300
301 ### Upstream Tools 301 ### Upstream Tools
302 - [RAS to Bounds](ras-to-bounds.md) - Generate constrained bounds from RAS 302 - [RAS to Bounds](ras-to-bounds.md) - Generate constrained bounds from RAS
303 - [Model Setting](metabolic-model-setting.md) - Extract model components 303 - [Import Metabolic Model](import-metabolic-model.md) - Extract model components
304 304
305 ### Downstream Tools 305 ### Downstream Tools
306 - [Flux to Map](flux-to-map.md) - Visualize flux distributions on metabolic maps 306 - [Flux to Map](flux-to-map.md) - Visualize flux distributions on metabolic maps
307 - [MAREA](marea.md) - Statistical analysis of flux differences 307 - [MAREA](marea.md) - Statistical analysis of flux differences
308 308
400 400
401 ## See Also 401 ## See Also
402 402
403 - [RAS to Bounds](ras-to-bounds.md) - Generate input constraints 403 - [RAS to Bounds](ras-to-bounds.md) - Generate input constraints
404 - [Flux to Map](flux-to-map.md) - Visualize flux results 404 - [Flux to Map](flux-to-map.md) - Visualize flux results
405 - [CBS Algorithm Documentation](../tutorials/cbs-algorithm.md) 405 - [CBS Algorithm Documentation](/tutorials/cbs-algorithm.md)
406 - [OPTGP Algorithm Documentation](../tutorials/optgp-algorithm.md) 406 - [OPTGP Algorithm Documentation](/tutorials/optgp-algorithm.md)