comparison COBRAxy/src/marea.py @ 542:fcdbc81feb45 draft

Uploaded

541:fa93040a75af

import pandas as pd
import itertools as it
import scipy.stats as st
import lxml.etree as ET
import math
import utils.general_utils as utils
from PIL import Image
import os
import argparse
import pyvips
from typing import Tuple, Union, Optional, List, Dict

    
    #General:
    parser.add_argument(
        '-td', '--tool_dir',
        type = str,
        required = True,
        help = 'your tool directory')
    
    parser.add_argument('-on', '--control', type = str)
    parser.add_argument('-ol', '--out_log', help = "Output log")

    #Computation details:

542:fcdbc81feb45

import pandas as pd
import itertools as it
import scipy.stats as st
import lxml.etree as ET
import math
try:
    from .utils import general_utils as utils
except:
    import utils.general_utils as utils
from PIL import Image
import os
import argparse
import pyvips
from typing import Tuple, Union, Optional, List, Dict

    
    #General:
    parser.add_argument(
        '-td', '--tool_dir',
        type = str,
        default = os.path.dirname(os.path.abspath(__file__)),
        help = 'your tool directory (default: auto-detected package location)')
    
    parser.add_argument('-on', '--control', type = str)
    parser.add_argument('-ol', '--out_log', help = "Output log")

    #Computation details: