Mercurial > repos > bimib > cobraxy

diff COBRAxy/custom_data_generator.py @ 397:de4a373e338b draft default tip

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author francesco_lapi
date Fri, 05 Sep 2025 13:35:35 +0000
parents dab29c3a5281
children
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--- a/COBRAxy/custom_data_generator.py	Fri Sep 05 13:28:09 2025 +0000
+++ b/COBRAxy/custom_data_generator.py	Fri Sep 05 13:35:35 2025 +0000
@@ -250,7 +250,7 @@
 
     if ARGS.name == "ENGRO2" and ARGS.gene_format != "Default":
 
-        model = utils.convert_genes(model, ARGS.gene_format.replace(" ", "_"))
+        model = utils.convert_genes(model, ARGS.gene_format.replace("HGNC_", "HGNC "))
 
     # generate data
     rules = generate_rules(model, asParsed = False)