# HG changeset patch # User luca_milaz # Date 1758625088 0 # Node ID 14232f4c44400c59501ee3e27209783b5cb5c85c # Parent 12894ade26ef3a67f3665e5515646d8f2971b96a Uploaded diff -r 12894ade26ef -r 14232f4c4440 COBRAxy/flux_simulation_beta.xml --- a/COBRAxy/flux_simulation_beta.xml Tue Sep 23 07:19:49 2025 +0000 +++ b/COBRAxy/flux_simulation_beta.xml Tue Sep 23 10:58:08 2025 +0000 @@ -181,6 +181,8 @@ - Samples: reporting the sampled fluxes for each reaction (reaction names on the rows and sample names on the columns). Format: tab-separated. - a log file (.txt). +**TIP**: Bounds generated by RAStoBound are grouped in a collection. You can select collections by clicking on "Dataset Collection" option in the "Bound file(s):" input parameter. + **TIP**: The Batches parameter helps maintain memory efficiency. For 10,000 samples, use n_samples=1,000 and n_batches=10. **TIP**: The Thinning parameter for OPTGP helps converge to stationary distribution.