Mercurial > repos > bimib > cobraxy
changeset 482:6e9eabe58298 draft
Uploaded
| author | luca_milaz |
|---|---|
| date | Mon, 22 Sep 2025 17:14:36 +0000 |
| parents | 816e5b9b6f84 |
| children | 1d1fa7e274bb |
| files | COBRAxy/integrated_tool_panel.xml COBRAxy/local/pickle files/HMRcore_genes.p COBRAxy/local/pickle files/HMRcore_rules.p COBRAxy/local/pickle files/Recon_genes.p COBRAxy/local/pickle files/Recon_rules.p COBRAxy/marea_cluster.py COBRAxy/marea_macros.xml COBRAxy/ras_generator_beta.xml |
| diffstat | 2 files changed, 2 insertions(+), 7 deletions(-) [+] |
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--- a/COBRAxy/integrated_tool_panel.xml Mon Sep 22 16:54:41 2025 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,6 +0,0 @@ -<section id="metabolic_analysis" name="Metabolic Analysis" version=""> - <tool id="ras_generator" /> <!-- This will appear first --> - <tool id="rps_generator" /> <!-- This will appear second --> - <tool id="marea_cluster" /> <!-- This will appear third --> -</section> - \ No newline at end of file
--- a/COBRAxy/ras_generator_beta.xml Mon Sep 22 16:54:41 2025 +0000 +++ b/COBRAxy/ras_generator_beta.xml Mon Sep 22 17:14:36 2025 +0000 @@ -25,7 +25,7 @@ </command> <inputs> <param name="model_upload" argument="--model_upload" type="data" format="csv,tsv,tabular" - label="Model rules file:" help="Upload a CSV/TSV file containing reaction rules generated by the Model Initialization tool." /> + label="Model file:" help="Upload a CSV/TSV file containing the information generated by the Model Initialization tool." /> <param name="input" argument="--input" type="data" format="tabular,csv,tsv" label="Gene Expression dataset:" /> <param name="name" argument="--name" type="text" label="Dataset's name:" value="Dataset_RAS" help="Default: Dataset_RAS. Do not use white spaces or special symbols." /> @@ -103,3 +103,4 @@ <expand macro="citations" /> </tool> +