Mercurial > repos > bimib > cobraxy

changeset 522:73c1de8f2d89 draft default tip

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Uploaded
author luca_milaz
date Thu, 09 Oct 2025 10:47:22 +0000
parents dd159f41b94c
children
files COBRAxy/flux_simulation.xml
diffstat 1 files changed, 15 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/flux_simulation.xml	Thu Oct 09 10:30:08 2025 +0000
+++ b/COBRAxy/flux_simulation.xml	Thu Oct 09 10:47:22 2025 +0000
@@ -171,30 +171,34 @@
 
     <outputs>
         <data format="txt" name="log" label="Flux Simulation - Log" />
-        <!---<data name="output" format="tabular" label="Fluxes">
-            <discover_datasets pattern="__name_and_ext__" directory="flux_simulation" visible="true" />
-        </data>-->
+        
         <collection name="fluxes_results" type="list" label="Fluxes">
-            <filter>'fluxes' in str($sampling_params.output_types)</filter>
-            <discover_datasets name = "collection" pattern="__name_and_ext__" directory="flux_simulation"/>
+            <filter>sampling_params['sampling_enabled'] and 'fluxes' in sampling_params['output_types']</filter>
+            <discover_datasets name="collection" pattern="__name_and_ext__" directory="flux_simulation"/>
         </collection>
+        
         <data format="tabular" name="mean_results" label="Mean">
-            <filter>'mean' in str($sampling_params.output_types)</filter>
+            <filter>sampling_params['sampling_enabled'] and 'mean' in sampling_params['output_types']</filter>
         </data>
+        
         <data format="tabular" name="median_results" label="Median">
-            <filter>'median' in str($sampling_params.output_types)</filter>
+            <filter>sampling_params['sampling_enabled'] and 'median' in sampling_params['output_types']</filter>
         </data>
+        
         <data format="tabular" name="quantile_results" label="Quantiles">
-            <filter>'quantiles' in str($sampling_params.output_types)</filter>
+            <filter>sampling_params['sampling_enabled'] and 'quantiles' in sampling_params['output_types']</filter>
         </data>
+        
         <data format="tabular" name="fva_results" label="FVA">
-            <filter>'FVA' in str($output_types_analysis)</filter>
+            <filter>'FVA' in output_types_analysis</filter>
         </data>
+        
         <data format="tabular" name="pFBA_results" label="pFBA">
-            <filter>'pFBA' in str($output_types_analysis)</filter>
+            <filter>'pFBA' in output_types_analysis</filter>
         </data>
+        
         <data format="tabular" name="sensitivity_results" label="Sensitivity">
-            <filter>'sensitivity' in str($output_types_analysis)</filter>
+            <filter>'sensitivity' in output_types_analysis</filter>
         </data>
     </outputs>