Mercurial > repos > bimib > marea

diff Marea/marea_cluster.py @ 9:7c76e8e319c2 draft

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fix cluster file and help section
author bimib
date Wed, 13 Feb 2019 04:01:21 -0500
parents 771a40335876
children 2405255d6a09
line wrap: on
line diff
--- a/Marea/marea_cluster.py	Thu Nov 15 07:36:28 2018 -0500
+++ b/Marea/marea_cluster.py	Wed Feb 13 04:01:21 2019 -0500
@@ -577,7 +577,12 @@
 def main():
     args = process_args(sys.argv)
     if args.k_min > args.k_max:
-        sys.exit('Execution aborted: max cluster > min cluster')
+         warning('k range boundaries inverted.')
+         tmp = args.k_min
+         args.k_min = args.k_max
+         args.k_max = tmp
+    else: 
+        warning('k range correct.')
     if args.rules_selector == 'HMRcore':
         recon = pk.load(open(args.tool_dir + '/local/HMRcore_rules.p', 'rb'))
     elif args.rules_selector == 'Recon':