# HG changeset patch # User bimib # Date 1609710312 0 # Node ID 3b0e71e28c0bb3ed46f8913312c8a3abb4ba0670 # Parent 3f144565551f315e4a98d24e4bec8219037ab131 Fix custom rules not in xml diff -r 3f144565551f -r 3b0e71e28c0b Marea/ras_generator.py --- a/Marea/ras_generator.py Wed Jun 03 12:00:40 2020 -0400 +++ b/Marea/ras_generator.py Sun Jan 03 21:45:12 2021 +0000 @@ -430,7 +430,7 @@ react = recon.reactions rules = [react[i].gene_reaction_rule for i in range(len(react))] ids = [react[i].id for i in range(len(react))] - except cb.io.sbml3.CobraSBMLError: + except: try: data = (pd.read_csv(data, sep = '\t', dtype = str, engine='python')).fillna('') if len(data.columns) < 2: