Mercurial > repos > bimib > marea_2
changeset 116:902921535134 draft
Uploaded
author | luca_milaz |
---|---|
date | Sun, 21 Jul 2024 19:21:38 +0000 |
parents | 5971a04cc59a |
children | 1061a1cbca8c |
files | marea_2/ras_to_bounds.py |
diffstat | 1 files changed, 3 insertions(+), 1 deletions(-) [+] |
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--- a/marea_2/ras_to_bounds.py Sun Jul 21 19:18:46 2024 +0000 +++ b/marea_2/ras_to_bounds.py Sun Jul 21 19:21:38 2024 +0000 @@ -111,7 +111,7 @@ model_new.reactions.get_by_id(reaction).lower_bound=float(df_FVA.loc[reaction,"minimum"]) model_new.reactions.get_by_id(reaction).upper_bound=float(df_FVA.loc[reaction,"maximum"]) - if(ras is not None): + if(ras is not None):#iterate over cells for reaction in rxns_ids: if reaction in ras.keys(): lower_bound=model_new.reactions.get_by_id(reaction).lower_bound @@ -152,6 +152,8 @@ ARGS.output_folder = 'ras_to_bounds/' + warning(ARGS.input_ras) + boundsPath = utils.FilePath("bounds", ".csv", prefix = ARGS.output_folder) mediumPath = utils.FilePath("medium", ".csv", prefix = ARGS.output_folder)