Mercurial > repos > bimib > marea_2
changeset 367:b2b2312b8f77 draft
Uploaded
author | luca_milaz |
---|---|
date | Wed, 18 Sep 2024 12:03:47 +0000 |
parents | 5b703d9a45d5 |
children | 5443289f6edb |
files | marea_2/custom_data_generator.xml |
diffstat | 1 files changed, 4 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/marea_2/custom_data_generator.xml Wed Sep 18 09:34:01 2024 +0000 +++ b/marea_2/custom_data_generator.xml Wed Sep 18 12:03:47 2024 +0000 @@ -43,7 +43,8 @@ What it does ------------- -This tool generates two files containing reactions and rules respectively, starting from a custom model in JSON or XML format, that can be used as inputs for the RAS and RPS generator modules. +This tool generates four files containing reactions, rules, reaction bounds and medium composition respectively, starting from a custom model in JSON or XML format. +Reactions and rules can be used as inputs for the RAS and RPS generator tools. Accepted files: - A model: JSON or XML file reporting reactions and rules contained in the model. @@ -55,6 +56,8 @@ The tool generates: - rules: reporting the rules for each reaction in the custom model given. Format: csv or pickle. - reactions: reporting the reactions in the custom model given. Format: csv or pickle. + - reaction bounds: reporting the lower and upper bounds of each model reaction. Format: csv or pickle. + - medium composition: reporting the list of exchange/transport reactions. Format: csv or pickle. - a log file (.txt). ]]> </help>