Mercurial > repos > bimib > marea_2

changeset 84:fd3d3516436a draft

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Uploaded
author luca_milaz
date Fri, 19 Jul 2024 20:20:13 +0000
parents 9074200334ca
children 83a8e208a618
files marea_2/custom_data_generator.py
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/marea_2/custom_data_generator.py	Fri Jul 19 20:17:34 2024 +0000
+++ b/marea_2/custom_data_generator.py	Fri Jul 19 20:20:13 2024 +0000
@@ -201,8 +201,8 @@
         utils.writePickle(reactionsPath, reactions)
         utils.writePickle(boundsPath, bounds)
         utils.writePickle(mediumPath, medium)
-        bounds.to_pickle(boundsPath)
-        medium.to_pickle(mediumPath)
+        bounds.to_pickle(boundsPath.show())
+        medium.to_pickle(mediumPath.show())
     
     elif ARGS.output_format is utils.FileFormat.CSV:
         rules = generate_rules(model, asParsed = False)
@@ -211,8 +211,8 @@
         medium = get_medium(model)
         save_as_csv(rules,     rulesPath,     ("ReactionID", "Rule"))
         save_as_csv(reactions, reactionsPath, ("ReactionID", "Reaction"))
-        bounds.to_csv(boundsPath)
-        medium.to_csv(mediumPath)
+        bounds.to_csv(boundsPath.show())
+        medium.to_csv(mediumPath.show())
 
 
     # ^ Please if anyone works on this after updating python to 3.12 change the if/elif into a match statement!!