diff demo_files/father_1.fastq @ 0:05c27700e5ca

initial commit
author biomonika <biomonika@psu.edu>
date Thu, 04 Sep 2014 18:24:19 -0400
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/demo_files/father_1.fastq	Thu Sep 04 18:24:19 2014 -0400
@@ -0,0 +1,132 @@
+@HISEQ1:121:C0EP5ACXX:7:1203:4036:101367/1
+CCTCTCTCTACAGTGTCCTCTCTCTTCTTCTCTGTTCTTGTTCGAATCTCTTCCAAGCCTAGGATGGAGCTTTTGCTCCTCCCCTCT
++
+JJJJJIJJJJIJJ?EFIIIGIJIGIJIIHIJJIJGIIJIIGIIIFHIJJIJGECAGGIFHCEFCEFDCAEEECDDCCDCCDDDD?B?
+@HISEQ1:121:C0EP5ACXX:7:1104:4621:84657/1
+TCGAAAGAGAGGCAATAATTGTAAAGTAAGGGTTAAGTGTTGATGGGTAAAGTTTTGGGTATACGGGGCGAATCCCCACAATTTGCN
++
+JJJJJJJIJIJJJJJJJJJJIHIIJJDHIIJJDGIIIFGFHIGIIJJ@EHIJDHHHHFF;BAEEDDDDDDDDDDDDDDDDBDDDDDE
+@HISEQ1:121:C0EP5ACXX:7:2302:14544:194571/1
+AAAACGCTCTCTCCTCTCTCTACAGTGTCCTCTCTCTTCTTCTCTGTTCTTGTTCGAATCTCTTCCAAGCCTAGGATGGAGCTTTTG
++
+IJJJJHIJIIGHIIIJIIHHIJIIIGHIIJJJJJJJJJJIJJIJIIHIIJJJIJJGEGIHHEHHECEFFFDCECEDDDDCDDDDDC:
+@HISEQ1:121:C0EP5ACXX:7:2104:2793:10052/1
+CGCAGGGAGCAGAGGAGGCCAGGAGGGAACCAAGCACCGATCTGAGAACCTGGGAGCAAAAATCGAAAGAGAGGCAATAATTGTANN
++
+JJJJJJJGIIIJJJJGJJJJJJJGJJJGHIIIJJJJHHHFDDEDDDDDDDDDDDDDDDDDDDDDDBCDDDDDDBDDDDDDEEDDCDC
+@HISEQ1:121:C0EP5ACXX:7:1305:17112:135146/1
+TCTCTCCTCTCTCTACAGTGTCCTCTCTCTTCTTCTCTGTTCTTTTTCGAATCTCTTCCAAGCCTAGGATGGAGCTTTTGCTCCTCC
++
+JJJJJJJJJJJJJJJJJIGGIJJJJJJJJJJJJJJJJJJJJJJJJJIJJHIIJJJJJJHHHHHFFFFFEEEDEDDDDDDDDCDDDDD
+@HISEQ1:121:C0EP5ACXX:7:1308:20836:74165/1
+CAGTGTCCTCTCTCTTCTTCTCTGTTCTTGTTCGAATCTCTTCCAAGCCTAGGATGGAGCTTTTGCTCCTCCCCTCTGTGCTTGTTT
++
+IIIF@BIHGGHIIGHIGIIIIIGIIEHIIIIIIIIEIIIIIIIHIIIIIIIIHIIIIIIIDHHGHHHFFFFFDACDCDCCDDDDDDC
+@HISEQ1:121:C0EP5ACXX:7:1307:20902:61270/1
+AGGGCTTCAATTCGAGCTTCTGCAGTAGACTCCAAATAAGAGGCAAGTGAAGAGATTCCGGTGAGAGCAGCCTTCAATCCATCTCCN
++
+IIJJJIIJJGEGIJJIJDIIIIAGIIGGIIGIIJIIIIJEHJGHEDDCCFFEEECCEACD?;;@ACDDCCDDDDDDDCD?CA@CDCC
+@HISEQ1:121:C0EP5ACXX:7:1106:19675:197765/1
+TAACCCTTACTTTACAATTATTGCCTCTCTTTCGATTTTTGCTCCCAGGTTCTCAGATCGGTGCTTGGTTCCCTCCTGGCCTCCTCT
++
+JJJJJJJJJIIJJIIJIIJIJJJJIJJIJJJJJJIIJJJJIGJJJIJJIHHGGIJJFJGHGHDFFFEDEDEDDDDDDDDBDDDBDDC
+@HISEQ1:121:C0EP5ACXX:7:1102:8367:114087/1
+AACGCTCTCTCCTCTCTCTCCGGTGTCCTCTCTCT
++
+IGIGB=?AGHEAH<EEBEB31))00090*??DGEE
+@HISEQ1:121:C0EP5ACXX:7:2102:5258:155716/1
+CATCGGATCTGAGATAGGGGGTTGAGTTAGGGCTTCAATTCGAGCTTCTGCAGTAGACTCCAAATAAGAGGCAAGTGAAG
++
+GEGIII8CFDB:B0*?DGGHI';:7?7??;>@>>ACC;;@;?>5;8>CCCCCC:A>C@:CCCC:@@>CC3+8???>CCCA
+@HISEQ1:121:C0EP5ACXX:7:2301:2438:126170/1
+ACTTTACCCATCAACACTTAACCCTTACTTTACAATTATTGCCTCTCTTTCGATTTTTGCTCCCAGGTTCTCAGATCGGTGCTTGGT
++
+=:EFEIIIEEBBEEFEFEFE4?DGFIECFII>GFGFIIIIFGFGFIIIIIIC;DEIFIF<EEF1@DDBAACCACA>AB@?5=AA@BB
+@HISEQ1:121:C0EP5ACXX:7:2307:15824:34753/1
+CTTGTTTCATTTTGTGGTGGAACACATAATTTGCCCTTGCAAATTGTGGGGATTCGCCCCGTATACCCAAAACTTTACCCATCAACN
++
+JJJJJJJHGHJJIJGIIGGIJJIGIIJJJJJJIJIIJJIIJJJJJGDHGGGHHGIHHHFDDDDDDFDDDDDBBCCDDDDDDDDDDDD
+@HISEQ1:121:C0EP5ACXX:7:1307:10967:98956/1
+CCGGAATCTCTTCACTTGCCTCTTATTTGGAGTCTACTGCAGAAGCTCGAATTGAAGCCCTAACTCAACCCCCTATCTCAGATCCGN
++
+JIJJIIJJIHGHIJGIJJJJJJJJJIIIJIGGHHIIJJJJJJJJIJJJJGCGHGHHGHFFFFEEECEEDDDBDBDCDDDCCCDDCD?
+@HISEQ1:121:C0EP5ACXX:7:1204:2070:27164/1
+TTGTGGGGATTCGCCCCGTATACCCAAAACTTTACCCATCAACACTTAACCCTTACTTTACAATTATTGCCTCTCTTTCGATTTTTG
++
+JJJGHIJJHIJJGGIJJIFHGIIIJJJJJJJJIJJJJJFIIHHHHHFFFFFDEEEEEDEDDDDDDDEEDDCDDDDDDDDD@DDDDCB
+@HISEQ1:121:C0EP5ACXX:7:2203:9357:39154/1
+CCTCTCTTTCGATTTTTGCTCCCAGGTTCTCAGATCGGTGCTTGGTTCCTTCCTGGCCTCCTCTGCTCCCTGCGAATGGTGATTGGN
++
+J@FIIJJJJJJJIGCHIDGEHGIJGIFGIJIJJIJIJIIHHIIEG@FHIJIHGIGEHHHHFDFFEDEDEDDCDDD/=CDDDCC>AD<
+@HISEQ1:121:C0EP5ACXX:7:1301:9698:5102/1
+TCACCGGAATCTCTTCACTTGCCTCTTATTTGGAGTCTACTGCAGAAGCTCGAATTGAAGCCCTAACTCAACCCCCTATCTCAGATC
++
+JJJJJIJJIIIIJJJIIJIJJJJIJCHGIJJJJJJFHIJJJJJJJJJJJJJJIHHHHHEEEBEECEEEDDDCDDDDBBDDDDDDDDD
+@HISEQ1:121:C0EP5ACXX:7:1301:12379:185214/1
+TCCCTGCGAATGGTGATTGGAGATGGATTGAAGGCTGCTCTCACCGGAATCTCTTCACTTGCCTCTTATTTGGAGTCTACTGCAGNN
++
+IHHIIFIHIJJJJ9DHHIJIHEGIIGEIDFHIIIIEHIHEFGHJJIIFHFFFFFEFDC>CC>CCCDD@CDDECDDAACCDEDDDDDC
+@HISEQ1:121:C0EP5ACXX:7:1302:19292:99635/1
+CTTCACTTGCCTCTTATTTGGAGTCTACTGCAGAAGCTCGAATTGAAGCCCTAACTCAACCCCCTATCTCAGATCCGATGCTCGGCG
++
+JJJJJJJJJJJIIJJGIJJJJGIFHIJJJJJJJJJJJIJEGIJJJJJJIJJJHEEEEEFFFFDDDBCDDDDCCCDDDBBDDCDBDBD
+@HISEQ1:121:C0EP5ACXX:7:2306:17747:145219/1
+TAGAAAATAGTAAACAAACTATAGAATTGAAACAAGAGCCACACCAGGAAAGAGCCTTGATCAAATAAATCAAACCGATCTAACCT
++
+G@GIHGIGIGAEC@EEHIGGIGEFGH>GHHIIIIHIEICHGHIGIIIFCGGIIIGECEC;;?CDDFFC>CACACA?BBDD?(:AAC
+@HISEQ1:121:C0EP5ACXX:7:1304:7016:24190/1
+ATTGTGGGGATTCGCCCCGTATACCCAAAACTTTACCCATCAACACTTAACCCTTACTTTACAATTATTGCCTCTCTTTCGATTTTT
++
+IJIIHIIIJJIJIIIIJIGDFEHJIHJJJJJJJJJJJGIJJHHHHHFFFFFFCDEEEDDDDCDDDDDEECCDDDDDDDDDDBEDDDD
+@HISEQ1:121:C0EP5ACXX:7:2301:6715:183785/1
+CTTGAAGGAGTTTCGTTCCTCGCCTCTGTTTTCGCAAGGAGTTATGGACAACCCCCCTTCGTTGCTGGAACCACAACCCAAGGTTAG
++
+JJJJJJJJIJGHJJJJJIIIIIJJIJJIHIJJIJJJIJHFHHFFFFFDEEDDDDDDDDDDDDDDDDDDDDDDBDDDDDDD?BD>CCA
+@HISEQ1:121:C0EP5ACXX:7:1203:2790:175160/1
+TCGGCGACCTAAAGAGACTGTATTCTTCAGCAACAATCAGATCCCCAGATTGATTTGCTCTGATGGCCGCTCTTGAAGGAGTTTCGT
++
+IIIJIJJJFJJJJJGIDGHIJIGIDIIFHJGGGGGIIJGDHHHHFFFDDEEECDDCCDCDDCCDDDDDBDDBBDCDDD<<ACC@ABB
+@HISEQ1:121:C0EP5ACXX:7:2308:5369:3337/1
+GGAACCACAACCCAAGGTTAGATCGGTTTGATTTATTTGATCAAGGCTCTTTCCTGGTGTGGCTCTTGTTTCAATTCTATAGTTTGT
++
+GIDGIBH<FAFEHIGGIB@?G@HADGHHGG)BFGC@FGHIGHGHIHGIGGHEHFFFD3;6=?BBCCAA>@CCC>CC@C;ADDDD@:8
+@HISEQ1:121:C0EP5ACXX:7:1102:17294:172346/1
+ATAATACATCTAATCTTGAGATCCAACATGCACAGTCTCAACTGGAAAGGATCAATTCTAACTAGATTAGAATAAGCCAGGGAAACN
++
+JJJJJJJIJIJJJJJJJJIGIJJJJJJJJJIJJJJJJJJJGIJJJJJIJHIJJJIIIJJJJIIJJFHHHHHFFFFFFCEDDBDDDCA
+@HISEQ1:121:C0EP5ACXX:7:1208:9741:160200/1
+TGCTGGAACCACAACCCAAGGTTAGATCGGTTTGATTTATTTGATCAAGGCTCTTTCCTGGTGTGGCTCTTGTTTCAATTCTATAGT
++
+9A@H<GC3CF;DED7?:BBFED@FFBCFHFFE>(..=3?C:);;.)7?@>;>A>AC@C@C(5((5,59@C:@(:(4(::4:@4>3:B
+@HISEQ1:121:C0EP5ACXX:7:1304:10851:86218/1
+CGTTGTAAGATTAGTTATGTTTCCCTGGCTTATTCTAATCTAGTTAGAATTGATCCTTTCCAGTTGAGACTGTGCATGTTGGATCTC
++
+EHBEAHGGEFHGB@EDDG@?FEGIIGGGGGCHGIBGIGHGE<F?BGIGGHIAABFDFHHID;7=CGGBAECE;?@3;@@@@AC>ACA
+@HISEQ1:121:C0EP5ACXX:7:2204:19880:81834/1
+AGGAAAATACTTTATCAAAGTCATAATTAAGACTATGCACTCTATGAATATCACTGAAGTTCTTCAACAGAATAATCACAAGGCTTG
++
+JJJJJJJJJJJJJIJJJIIJGGGJIJJJJJIJIJJJJIJJIJJJJJJJJJJJJJIIIBFGHIFHJJJJJJHHHHHGFFFFDECCCEB
+@HISEQ1:121:C0EP5ACXX:7:2303:19926:13623/1
+GAATACCAACTCCCCAAATTTACCAAATCTCACACCACCTTGTGGTAGCACAAAAAGTTCCAAACCAAAAGTGACCAAATCAGGTAC
++
+IJJIJJGIJJJJJJJJIJJJJJJIJJJJJGIJHIJEHIIJJJIIICGIHHHHHFFFF@CDEDCEDDDDDDDACDDDDDDDDDDD>CC
+@HISEQ1:121:C0EP5ACXX:7:2306:15928:63590/1
+AAAATAGTACGACCAACATCAATGATGCTTACCAACAAAACAAGGGGAATACCAACTCCCCAAATTTACCAAATCTCACACCACCTT
++
+IIGHIGBAFHHGGIIIEDD@DG@@@GGEEGIIGHGIGGHGIIGGCAHHFFEE3@DDAC@ABA;ACCCCDCCCBCCC>ACCCBBBBA@
+@HISEQ1:121:C0EP5ACXX:7:2105:7681:133379/1
+GTACTATTTTTGGTAGCATCATTAATCACCATATCAGCAAAGGAAAGCTTCCCCTTCCCCTTATCCATAGCAACCCTCTCTTCAGTN
++
+JJJJJJFIJJJGICGGGIJGJEIIJJJJJJJJJJIIIIIJJJIJJIIIJJIJJJJHHHHHFFFFFECEEEEDCDDBDDDDDCDDCBA
+@HISEQ1:121:C0EP5ACXX:7:2102:2292:138014/1
+CATTAATCACCATATCAGCAAAGGAAAGCTTCCCCTTCCCCTTATCCATAGCAACCCTCTCTTCAGTAAATGCACACACCCACTCAC
++
+JJJJJJJJIJJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJJJJIIHHHHHFDFFFFEEDEEDEDDDDDDDDDDDDC
+@HISEQ1:121:C0EP5ACXX:7:1307:11840:86884/1
+TTTGCTTGGGTTCTAGCAAGAGCAAGTTTATTAAAGAGAGCTTTGGGATCAAAAGTTTTGGTACCTGATTTGGTCACTTTTGGTTTG
++
+JJIIJJJIJJFHGHIJJJJIGIIJJJJIJHJJJJJJJIGHHHFFFFDDEDEDDDDCDEDDDBCDCDDDDDEDCBDDDDDDDDCDDDD
+@HISEQ1:121:C0EP5ACXX:7:2207:1406:103949/1
+AACCCTCTCTTCAGTAAATGCACACACCCACTCACTGTATCTAAAGCTCACTATGAATATTAACCAGTACAGAGCAGATTTACTCGG
++
+JJJJJJJJJJJJIJIGJJJJJJIJJJJJJJJJIJJJJHIJJJIJIJJJJJJJJJJIIJJJJHHHEGFDFFFFEEDDEDDDDDEDDDD