# HG changeset patch
# User bitlab
# Date 1605618263 0
# Node ID dbdb10e4c8b54e2046123c248ebea23b4a8e3505
# Parent  3872220d09246337847d98fc8fa71e0a5bda048f
fixed binary format in frags align

diff -r 3872220d0924 -r dbdb10e4c8b5 gecko/frags2align.xml
--- a/gecko/frags2align.xml	Tue Nov 17 13:03:09 2020 +0000
+++ b/gecko/frags2align.xml	Tue Nov 17 13:04:23 2020 +0000
@@ -1,9 +1,9 @@
 <tool id="frags2align" name="Frags to align">
   <description>Extract alignments from a binary Frags file</description>
   <inputs>
-    <param name="fragsFile" format="data" label="Frags file" help="Binary Frags file" />
+    <param name="fragsFile" type="data" label="Frags file" help="Binary Frags file" />
     <param name="fastaX" type="data" format="fasta" label="Sequence X" help="Query sequence file in fasta format"/>    
-    <param name="fastaY" type="data" value="fasta" label="Sequence Y" help="Reference sequence file in fasta format" />
+    <param name="fastaY" type="data" format="fasta" label="Sequence Y" help="Reference sequence file in fasta format" />
   </inputs>
   <command> make all -C ${__tool_directory__}/src/ ; ${__tool_directory__}/bin/frags2align.sh $fragsFile $fastaX $fastaY $alignments </command>
   <outputs>