Mercurial > repos > bjoern-gruening > trna_prediction

diff tool_dependencies.xml @ 2:0fef99b5f63f draft default tip

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apply patch from Nicola Soranzo
author bjoern-gruening
date Sun, 24 Mar 2013 14:35:48 -0400
parents 65d282ef088e
children
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--- a/tool_dependencies.xml	Tue Mar 19 16:56:25 2013 -0400
+++ b/tool_dependencies.xml	Sun Mar 24 14:35:48 2013 -0400
@@ -29,7 +29,7 @@
                 <action type="shell_command">cd ./tRNAscan-SE-1.3.1 &amp;&amp; cp trnascan-1.4 covels-SE coves-SE eufindtRNA tRNAscan-SE $INSTALL_DIR/bin/</action>
                 <action type="shell_command">cd ./tRNAscan-SE-1.3.1 &amp;&amp; cp -R tRNAscanSE $INSTALL_DIR/bin/</action>
                 <action type="shell_command">cd ./tRNAscan-SE-1.3.1 &amp;&amp; cp TPCsignal Dsignal *.cm gcode.* $INSTALL_DIR/lib/tRNAscan-SE/</action>
-                <!-- for some reason infernal needs to be directly unter the bin/ from tRNAScan -->
+                <!-- for some reason infernal needs to be directly under the bin/ from tRNAScan -->
                 <action type="shell_command">wget ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz</action>
                 <action type="shell_command">tar xfvz infernal-1.0.2.tar.gz</action>
                 <action type="shell_command">cd infernal-1.0.2 &amp;&amp; ./configure --prefix=$INSTALL_DIR &amp;&amp; make &amp;&amp; make install</action>