comparison tool_dependencies.xml @ 1:0b2c2790838a

Update clone command.
author Daniel Blankenberg <dan@bx.psu.edu>
date Tue, 04 Feb 2014 17:00:25 -0500
parents ae1828dd8bbc
children 46bd908161b6
comparison
equal deleted inserted replaced
0:ae1828dd8bbc 1:0b2c2790838a
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="pyBamParser" version="0.0.1"> 3 <package name="pyBamParser" version="0.0.1">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">hg clone -r 76d75ab3475f8136d75c8f9a11e1e805bf3c857c https://bitbucket.org/dan/pybamparser pyBamParser</action> 6 <action type="shell_command">hg clone -r 21b1bc7611a7675d8f72e258e3ee39912d64c7e7 https://bitbucket.org/dan/pybamparser pyBamParser</action>
7 <action type="make_directory">$INSTALL_DIR/lib/python</action> 7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
9 <action type="set_environment"> 9 <action type="set_environment">
10 <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable> 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
11 </action> 11 </action>
12 </actions> 12 </actions>
13 </install> 13 </install>
14 <readme> 14 <readme>
15 Installs pyBamParser libraries. 15 Installs pyBamParser libraries.